C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromosome 15 open reading frame 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538348 C15orf40-006 ENSG00000169609 9606 - 15:82988963-83011607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000538348
Transcript ID Ovary Placenta Testis
ENST00000538348 11.477±0.00 18.649±0.00 12.408±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026F CIL_00026F_0001 CGP 15:82836946-82991057
CIL_00026I CIL_00026I_0001 CGP 15:82986207-83011641
CIL_0001L5 CIL_0001L5_0001 CGP 15:82988441-83067354

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118190 Fam103a1-002 protein_coding Mus_musculus 0 198
ENSMUST00000042166 Fam103a1-001 protein_coding Mus_musculus 0 198
ENSMUST00000099412 Gm10767-002 protein_coding Mus_musculus 1.99965e-42 176
ENSMUST00000168767 Gm10767-001 protein_coding Mus_musculus 1.99965e-42 176
ENSMUST00000178509 Gm9830-201 protein_coding Mus_musculus 1e-39 167

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