C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA E230008N13 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178561 E230008N13Rik-201 ENSMUSG00000035539 10090 + 4:45890303-45950774 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000178561
Transcript ID Bladder Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000178561 0.013±0.00 0.102±0.04 0.022±0.00 0.113±0.02 0.003±0.00 0.748±0.15 1.592±1.08 0.015±0.00 8.120±1.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086Q CIL_00086Q_0002 VISTA 4:45528456-46131469
CIL_0002JB CIL_0002JB_0002 CGP 4:45890303-46034761

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000460482 CCDC180-007 processed_transcript Homo_sapiens 0 1024
ENST00000494917 CCDC180-002 retained_intron Homo_sapiens 0 1053
ENST00000529487 CCDC180-001 protein_coding Homo_sapiens 0 1053

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