C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: contactin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179049 Cntn5-202 ENSMUSG00000039488 10090 - 9:9661363-10419090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000179049
Transcript ID Adipose Adrenal Bladder Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000179049 0.017±0.00 0.060±0.01 0.007±0.00 0.071±0.05 0.050±0.00 0.034±0.00 0.003±0.00 0.022±0.00 0.014±0.00 0.009±0.00 0.145±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CN CIL_0003CN_0002 CGP 9:8994329-10904775

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007605 IMP sensory perception of sound

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000279463 CNTN5-201 protein_coding Homo_sapiens 0 2887
ENST00000418526 CNTN5-004 protein_coding Homo_sapiens 0 2887
ENST00000524560 CNTN5-005 processed_transcript Homo_sapiens 0 1343
ENST00000524871 CNTN5-001 protein_coding Homo_sapiens 0 2887
ENST00000525236 CNTN5-009 processed_transcript Homo_sapiens 0 429
ENST00000527185 CNTN5-003 protein_coding Homo_sapiens 0 2398
ENST00000528682 CNTN5-006 protein_coding Homo_sapiens 0 2887
ENST00000528727 CNTN5-002 retained_intron Homo_sapiens 0 1550
ENST00000619298 CNTN5-202 protein_coding Homo_sapiens 0 2887

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