C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6669
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179088 RP24-347J6.2-001 ENSMUSG00000099344 10090 + 7:31817113-31818109 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 878
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 662
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 854
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 878
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 878
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 693
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 617
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 224
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 767
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 684
ENST00000435908 GAPDHP59-001 processed_pseudogene Homo_sapiens 0 217
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 604
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 409
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 425
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 662
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 662
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 628
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 569
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 697
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 468
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 272
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 669
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 693
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 580
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 767

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