C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444823 GAPDHP23-001 ENSG00000235595 9606 - 1:119462029-119463021 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverMuscleENST00000444823
Transcript ID Brain Breast Colon Heart Kidney Liver Muscle
ENST00000444823 0.098±0.01 0.029±0.00 0.013±0.00 0.028±0.00 0.014±0.00 0.023±0.00 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IA CIL_0005IA_0001 CGP 1:119414931-119515054

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 701
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 701
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 701
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 701
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 689
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 678
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 678
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 673
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 673
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 669
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 664
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000182266 Gm2467-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000120200 Gm11557-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 621
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000133495 3000002C10Rik-001 transcribed_processed_pseudogene Mus_musculus 0 610
ENSMUST00000125451 3000002C10Rik-003 processed_transcript Mus_musculus 0 610
ENSMUST00000144161 3000002C10Rik-002 processed_transcript Mus_musculus 0 610
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 601
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000122453 Gm12017-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000182906 Gm8100-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000182995 Gm5335-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 577
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000121506 Gm5270-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000182369 Gm6283-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000181978 Gm8927-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000182596 Gm5732-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000182021 Gm4929-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000183076 Gm5345-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000118148 Gm13592-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000182707 Gm9061-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000182234 Gm4804-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000118730 Gm13326-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000120199 Gm12969-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000182716 Gm6771-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000122085 Gm15593-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000182847 Gm4812-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000153034 Gm10364-001 transcribed_processed_pseudogene Mus_musculus 0 484
ENSMUST00000076633 Gm10364-002 processed_transcript Mus_musculus 0 484
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000183288 Gm7833-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000122068 Gm11960-001 transcribed_processed_pseudogene Mus_musculus 0 481
ENSMUST00000181063 Gm11960-002 processed_transcript Mus_musculus 0 481
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000182832 Gm7734-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000182237 Gm6946-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000118792 Gm18859-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000182235 Gm7745-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 460
ENSMUST00000181990 Gm4823-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000181445 Gm7741-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000182201 Gm5300-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000117214 Gm13870-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000122262 Gm6298-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000182472 Gm6114-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000183205 Gm7627-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000182220 Gm7763-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000181525 Gm5706-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000183005 Gm8984-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000183159 Gm6317-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000182285 Gm9381-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000182864 Gm5327-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000188558 RP23-337B16.2-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000119692 Gm5760-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000182254 Gm9146-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000183000 Gm9341-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000179088 RP24-347J6.2-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000121399 Gm14113-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000183151 Gm26977-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000182945 Gm8955-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000180655 Gm5262-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000184486 Gm12117-001 translated_processed_pseudogene Mus_musculus 0 368
ENSMUST00000182302 Gm7132-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000181982 Gm5342-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000144205 Gapdh-005 processed_transcript Mus_musculus 0 350
ENSMUST00000118918 Gm11907-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000120728 Gm16177-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000181461 Gm2383-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000181607 Gm5974-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000182096 Gm8601-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000182391 Gm26913-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000182543 Gm7577-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000190817 RP24-369P14.1-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000183270 Gm17799-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000182417 Gm5354-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000182466 Gm17800-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000118893 Gm15957-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000181201 Gm7713-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 1.4013e-45 187
ENSMUST00000182372 Gm27023-001 processed_pseudogene Mus_musculus 7.9874e-44 182
ENSMUST00000183172 Gm26963-001 processed_pseudogene Mus_musculus 9.99967e-42 174
ENSMUST00000183831 Gm12117-002 protein_coding Mus_musculus 2e-39 167
ENSMUST00000182052 Gapdh-011 protein_coding Mus_musculus 3e-38 163
ENSMUST00000182115 Gapdh-016 processed_transcript Mus_musculus 4e-37 159
ENSMUST00000118859 Gm12719-001 processed_pseudogene Mus_musculus 5e-26 122
ENSMUST00000117238 Gm13761-001 processed_pseudogene Mus_musculus 4e-22 110
ENSMUST00000182277 Gapdh-010 protein_coding Mus_musculus 2e-20 104
ENSMUST00000182416 Gm3890-001 processed_pseudogene Mus_musculus 8e-19 99
ENSMUST00000182807 Gm27043-001 processed_pseudogene Mus_musculus 0.000000000000006 86

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