C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 518B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179555 Zfp518b-201 ENSMUSG00000046572 10090 - 5:38668484-38684826 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000179555
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000179555 0.512±0.05 0.973±0.07 3.615±2.74 0.652±0.28 0.256±0.00 0.577±0.16 0.475±0.24 0.347±0.12 1.145±0.03 0.485±0.17 1.176±0.51 1.471±0.92 0.302±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UW CIL_0008UW_0002 VISTA 5:38299839-38905514
CIL_0001XG CIL_0001XG_0002 CGP 5:38526814-38684826
CIL_0001XH CIL_0001XH_0002 CGP 5:38668484-38876812

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326756 ZNF518B-001 protein_coding Homo_sapiens 0 254

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