C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: arrestin, beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179755 Arrb1-201 ENSMUSG00000018909 10090 + 7:99535466-99606771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyPlacentaENSMUST00000179755
Transcript ID Heart Kidney Placenta
ENSMUST00000179755 1.267±0.00 1.504±0.00 0.644±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0002 VISTA 7:99059661-99661402
CIL_0008I3 CIL_0008I3_0002 VISTA 7:99464975-100069320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0007602 IMP phototransduction
GO:0008277 IMP regulation of G-protein coupled receptor protein signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360025 ARRB1-002 protein_coding Homo_sapiens 0 1735
ENST00000420843 ARRB1-001 protein_coding Homo_sapiens 0 1840
ENST00000524400 ARRB1-004 nonsense_mediated_decay Homo_sapiens 0 634
ENST00000527385 ARRB1-007 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000529280 ARRB1-009 retained_intron Homo_sapiens 0 374
ENST00000532447 ARRB1-012 protein_coding Homo_sapiens 0 593
ENST00000532525 ARRB1-006 protein_coding Homo_sapiens 0 989
ENST00000533255 ARRB1-008 retained_intron Homo_sapiens 0 621
ENST00000533609 ARRB1-005 nonsense_mediated_decay Homo_sapiens 0 630

Loading