C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ubiquitin specific peptidase 34 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000180046  |
Usp34-201 |
ENSMUSG00000056342 |
10090 | + |
11:23306895-23490560  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007N6 | CIL_0007N6_0002 | UCNEbase | 11:23268537-23489768 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004197 | ISS | cysteine-type endopeptidase activity |
| GO:0004221 | ISS | ubiquitin thiolesterase activity |
| GO:0004843 | ISS | ubiquitin-specific protease activity |
| GO:0005515 | IEA | protein binding |
| GO:0005575 | ND | cellular_component |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
| GO:0016055 | IEA | Wnt signaling pathway |
| GO:0016579 | IEA | protein deubiquitination |
| GO:0071108 | ISS | protein K48-linked deubiquitination |
| GO:0090263 | ISS | positive regulation of canonical Wnt signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000394457
|
AHSA2-001 | protein_coding | Homo_sapiens | 0 | 1526 |
|
ENST00000398571
|
USP34-001 | protein_coding | Homo_sapiens | 0 | 12720 |
|
ENST00000411912
|
USP34-002 | protein_coding | Homo_sapiens | 0 | 3868 |
|
ENST00000436269
|
USP34-005 | protein_coding | Homo_sapiens | 0 | 2370 |
|
ENST00000453133
|
USP34-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 1783 |
|
ENST00000453734
|
USP34-006 | protein_coding | Homo_sapiens | 0 | 3225 |
|
ENST00000460004
|
USP34-010 | processed_transcript | Homo_sapiens | 0 | 494 |
|
ENST00000463046
|
USP34-003 | retained_intron | Homo_sapiens | 0 | 1663 |
|
ENST00000467128
|
USP34-022 | processed_transcript | Homo_sapiens | 0 | 713 |
|
ENST00000468703
|
USP34-026 | retained_intron | Homo_sapiens | 0 | 219 |
|
ENST00000472689
|
USP34-009 | processed_transcript | Homo_sapiens | 0 | 676 |
|
ENST00000472706
|
USP34-012 | processed_transcript | Homo_sapiens | 0 | 558 |
|
ENST00000476716
|
USP34-021 | processed_transcript | Homo_sapiens | 0 | 778 |
|
ENST00000482250
|
USP34-018 | retained_intron | Homo_sapiens | 0 | 315 |
|
ENST00000483672
|
USP34-019 | retained_intron | Homo_sapiens | 0 | 375 |
|
ENST00000484179
|
USP34-014 | retained_intron | Homo_sapiens | 0 | 651 |
|
ENST00000487547
|
USP34-016 | retained_intron | Homo_sapiens | 0 | 383 |
|
ENST00000490527
|
USP34-017 | retained_intron | Homo_sapiens | 0 | 508 |
|
ENST00000490552
|
USP34-004 | retained_intron | Homo_sapiens | 0 | 388 |
|
ENST00000492604
|
USP34-025 | processed_transcript | Homo_sapiens | 0 | 268 |
|
ENST00000492882
|
USP34-015 | retained_intron | Homo_sapiens | 0 | 302 |
|
ENST00000494867
|
USP34-013 | retained_intron | Homo_sapiens | 0 | 398 |
|
ENST00000498268
|
USP34-024 | retained_intron | Homo_sapiens | 4.06377e-44 | 182 |
|
ENST00000611867
|
RP11-326L9.2-001 | unprocessed_pseudogene | Homo_sapiens | 0 | 289 |
