C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 34
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056342 Usp34 10090 + 11:23306895-23490560 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000125701 Usp34-002 23486805-23487323 processed_transcript
  ENSMUST00000129368 Usp34-003 23470289-23488368 protein_coding
  ENSMUST00000129521 Usp34-005 23457938-23460897 processed_transcript
  ENSMUST00000130131 Usp34-006 23420055-23456686 protein_coding
  ENSMUST00000137823 Usp34-001 23306916-23489744 protein_coding
  ENSMUST00000148927 Usp34-004 23458077-23460610 processed_transcript
  ENSMUST00000155984 Usp34-007 23414976-23420652 processed_transcript
  ENSMUST00000180046 Usp34-201 23306895-23490560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000130131ENSMUST00000137823
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000130131 N/A N/A N/A 4.868±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.320±0.00 N/A
ENSMUST00000137823 3.260±0.87 3.032±0.69 4.951±2.03 8.854±3.46 3.470±1.56 3.947±0.52 1.929±0.00 3.473±1.05 2.908±1.37 4.389±1.32 2.594±0.36 6.213±2.29 10.322±1.43 11.833±1.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007N6 CIL_0007N6_0002 UCNEbase 11:23268537-23489768

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004197 ISS cysteine-type endopeptidase activity
GO:0004221 ISS ubiquitin thiolesterase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016055 IEA Wnt signaling pathway
GO:0016579 IEA protein deubiquitination
GO:0071108 ISS protein K48-linked deubiquitination
GO:0090263 ISS positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000115464 USP34 ubiquitin specific peptidase 34 protein_coding Homo_sapiens

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