C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 34
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398571 USP34-001 ENSG00000115464 9606 - 2:61187463-61470769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398571 5.895±0.00 4.734±0.00 3.113±0.00 5.220±0.32 4.737±0.28 6.273±4.08 7.867±0.00 3.011±0.86 4.135±2.76 5.255±2.35 3.106±0.85 5.076±2.09 0.924±0.25 5.196±1.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004197 IMP cysteine-type endopeptidase activity
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016055 IEA Wnt signaling pathway
GO:0016579 IDA protein deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0071108 IDA protein K48-linked deubiquitination
GO:0090263 IDA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180046 Usp34-201 protein_coding Mus_musculus 0 12720
ENSMUST00000137823 Usp34-001 protein_coding Mus_musculus 0 12670
ENSMUST00000130131 Usp34-006 protein_coding Mus_musculus 0 3225
ENSMUST00000128372 Ahsa2-004 protein_coding Mus_musculus 0 1526
ENSMUST00000020529 Ahsa2-002 protein_coding Mus_musculus 0 1526
ENSMUST00000109539 Ahsa2-003 protein_coding Mus_musculus 0 1526
ENSMUST00000129368 Usp34-003 protein_coding Mus_musculus 0 778
ENSMUST00000129521 Usp34-005 processed_transcript Mus_musculus 0 606
ENSMUST00000125701 Usp34-002 processed_transcript Mus_musculus 0 388
ENSMUST00000148927 Usp34-004 processed_transcript Mus_musculus 0 307
ENSMUST00000124801 Ahsa2-008 processed_transcript Mus_musculus 0 235

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