C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sulfatase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180062 Sulf1-002 ENSMUSG00000016918 10090 + 1:12692323-12860371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000180062
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000180062 2.099±1.47 1.476±0.46 4.924±3.40 1.082±0.11 1.391±0.73 1.721±0.56 0.285±0.06 0.237±0.19 3.276±1.01 0.481±0.06 3.239±1.17 0.356±0.23 0.739±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SG CIL_0001SG_0003 CGP 1:11414105-12861192
CIL_00087Y CIL_00087Y_0002 VISTA 1:12314812-12917322
CIL_0001S3 CIL_0001S3_0003 CGP 1:12692277-12992650

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001502 ISS cartilage condensation
GO:0001822 IGI kidney development
GO:0001937 ISS negative regulation of endothelial cell proliferation
GO:0002063 IMP chondrocyte development
GO:0003094 IGI glomerular filtration
GO:0004065 ISS arylsulfatase activity
GO:0005509 IEA calcium ion binding
GO:0005615 ISS extracellular space
GO:0005783 ISS endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006790 ISO sulfur compound metabolic process
GO:0006915 IEA apoptotic process
GO:0007155 ISS cell adhesion
GO:0008449 ISO N-acetylglucosamine-6-sulfatase activity
GO:0009986 ISS cell surface
GO:0010575 IGI positive regulation vascular endothelial growth factor production
GO:0014846 IGI esophagus smooth muscle contraction
GO:0016525 ISS negative regulation of angiogenesis
GO:0030177 ISS positive regulation of Wnt signaling pathway
GO:0030201 IMP heparan sulfate proteoglycan metabolic process
GO:0030336 ISS negative regulation of cell migration
GO:0030513 ISS positive regulation of BMP signaling pathway
GO:0032836 IGI glomerular basement membrane development
GO:0035860 IDA glial cell-derived neurotrophic factor receptor signaling pathway
GO:0036022 ISS limb joint morphogenesis
GO:0040037 IGI negative regulation of fibroblast growth factor receptor signaling pathway
GO:0045121 ISS membrane raft
GO:0048010 ISS vascular endothelial growth factor receptor signaling pathway
GO:0048661 ISS positive regulation of smooth muscle cell proliferation
GO:0048706 IGI embryonic skeletal system development
GO:0051216 IMP cartilage development
GO:0060348 IGI bone development
GO:0060384 IGI innervation
GO:0060686 IDA negative regulation of prostatic bud formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000056080 sulf1-202 protein_coding Danio_rerio 3e-34 152
ENSDART00000027022 sulf1-201 protein_coding Danio_rerio 3e-34 152
ENSDART00000056081 sulf1-001 protein_coding Danio_rerio 3e-34 152
ENST00000260128 SULF1-201 protein_coding Homo_sapiens 0 3273
ENST00000402687 SULF1-004 protein_coding Homo_sapiens 0 3273
ENST00000419716 SULF1-003 protein_coding Homo_sapiens 0 3273
ENST00000458141 SULF1-001 protein_coding Homo_sapiens 0 3273
ENST00000521946 SULF1-005 processed_transcript Homo_sapiens 0 1866
ENST00000525061 SULF1-008 protein_coding Homo_sapiens 0 431
ENST00000525999 SULF1-015 protein_coding Homo_sapiens 0 647
ENST00000526808 SULF1-017 processed_transcript Homo_sapiens 0 241
ENST00000528286 SULF1-009 processed_transcript Homo_sapiens 9e-35 150
ENST00000530674 SULF1-007 retained_intron Homo_sapiens 0 699
ENST00000531064 SULF1-016 processed_transcript Homo_sapiens 0 656
ENST00000531512 SULF1-006 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000532015 SULF1-021 retained_intron Homo_sapiens 0 244
ENST00000616868 SULF1-202 protein_coding Homo_sapiens 0 2911

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