C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ECSIT homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180180 Ecsit-001 ENSMUSG00000066839 10090 - 9:22072246-22085438 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000180180
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000180180 8.879±2.35 18.252±3.09 8.530±1.02 7.620±1.51 9.717±2.66 9.757±1.22 21.048±3.91 26.069±2.44 11.669±5.58 6.686±1.36 23.154±4.73 8.750±2.96 4.555±1.85 8.259±2.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000764 CIL_000764_0002 CGP 9:22055460-22085438
CIL_000767 CIL_000767_0002 CGP 9:22072246-22109630

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001707 IMP mesoderm formation
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0004871 IDA signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005667 IDA transcription factor complex
GO:0005737 ISS cytoplasm
GO:0005739 IDA:ISS mitochondrion
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0007178 IDA transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0016651 ISS oxidoreductase activity, acting on NAD(P)H
GO:0030509 IDA BMP signaling pathway
GO:0045087 IEA innate immune response
GO:0051341 ISS regulation of oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252440 ECSIT-004 protein_coding Homo_sapiens 0 235
ENST00000270517 ECSIT-001 protein_coding Homo_sapiens 0 865
ENST00000417981 ECSIT-005 protein_coding Homo_sapiens 0 407
ENST00000585898 ECSIT-013 retained_intron Homo_sapiens 0 235
ENST00000588998 ECSIT-008 protein_coding Homo_sapiens 0 235
ENST00000591104 ECSIT-003 protein_coding Homo_sapiens 0 254
ENST00000592312 ECSIT-007 protein_coding Homo_sapiens 0 350
ENST00000592571 ECSIT-010 nonsense_mediated_decay Homo_sapiens 0 407

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