C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000767_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130159-ENSG00000130176 CGP 9606 19:11505916-11550323
GeneTranscriptPositionBiotype
ENSG00000130159 (ECSIT)
ECSIT signalling integrator 		ENST00000252440 (ECSIT-004) 11505929-11529137 protein_coding
ENST00000270517 (ECSIT-001) 11505916-11529174 protein_coding
ENST00000417981 (ECSIT-005) 11506002-11529172 protein_coding
ENST00000585318 (ECSIT-002) 11507490-11529132 protein_coding
ENST00000585898 (ECSIT-013) 11506075-11507709 retained_intron
ENST00000586149 (ECSIT-014) 11519097-11529099 protein_coding
ENST00000588998 (ECSIT-008) 11505929-11529096 protein_coding
ENST00000590480 (ECSIT-006) 11513111-11529130 protein_coding
ENST00000591104 (ECSIT-003) 11506184-11528865 protein_coding
ENST00000591352 (ECSIT-012) 11507772-11513858 processed_transcript
ENST00000592312 (ECSIT-007) 11506301-11529124 protein_coding
ENST00000592571 (ECSIT-010) 11505958-11513168 nonsense_mediated_decay
ENST00000592665 (ECSIT-009) 11513139-11528827 protein_coding
ENST00000593231 (ECSIT-011) 11507700-11513970 nonsense_mediated_decay
ENSG00000130176 (CNN1)
calponin 1, basic, smooth muscle 		ENST00000252456 (CNN1-001) 11538717-11550323 protein_coding
ENST00000535659 (CNN1-003) 11538775-11550000 protein_coding
ENST00000585869 (CNN1-005) 11540236-11541173 protein_coding
ENST00000586059 (CNN1-004) 11539894-11547906 protein_coding
ENST00000586577 (CNN1-008) 11546708-11549724 protein_coding
ENST00000587087 (CNN1-009) 11541190-11549959 protein_coding
ENST00000588468 (CNN1-006) 11538853-11542241 processed_transcript
ENST00000588935 (CNN1-007) 11547840-11550321 protein_coding
ENST00000592338 (CNN1-010) 11546675-11549758 protein_coding
ENST00000592923 (CNN1-002) 11538767-11550322 protein_coding
ENSG00000161914 (ZNF653)
zinc finger protein 653 		ENST00000293771 (ZNF653-001) 11483427-11505923 protein_coding
ENST00000588541 (ZNF653-008) 11495725-11505500 nonsense_mediated_decay
ENST00000589051 (ZNF653-007) 11483441-11486830 protein_coding
ENST00000590296 (ZNF653-005) 11483427-11486832 protein_coding
ENST00000590548 (ZNF653-003) 11483682-11505821 retained_intron
ENST00000592756 (ZNF653-006) 11484012-11487296 protein_coding
ENST00000593191 (ZNF653-004) 11496036-11505184 processed_transcript
ENSG00000213303 (CTC-398G3.2)
 ENST00000463278 (CTC-398G3.2-001) 11523436-11523831 processed_pseudogene
ENSG00000213304 (CTC-398G3.1)
 ENST00000483614 (CTC-398G3.1-001) 11521968-11522498 processed_pseudogene
ENSG00000244080 (RN7SL833P)
RNA, 7SL, cytoplasmic 833, pseudogene 		ENST00000498758 (RN7SL833P-201) 11516047-11516330 misc_RNA
CIL_000767_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000066839-ENSMUSG00000001349 CGP 10090 9:22072246-22109630
GeneTranscriptPositionBiotype
ENSMUSG00000001349 (Cnn1)
calponin 1 		ENSMUST00000001384 (Cnn1-201) 22099281-22109630 protein_coding
ENSMUSG00000066839 (Ecsit)
ECSIT homolog (Drosophila) 		ENSMUST00000098937 (Ecsit-201) 22072246-22085427 protein_coding
ENSMUST00000177967 (Ecsit-003) 22073492-22085427 protein_coding
ENSMUST00000179422 (Ecsit-002) 22072246-22085402 protein_coding
ENSMUST00000180180 (Ecsit-001) 22072246-22085438 protein_coding
ENSMUSG00000096981 (Gm16845)
predicted gene, 16845 		ENSMUST00000180419 (Gm16845-201) 22071032-22086122 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000767_0001ENSG00000130159ENST00000252440ENST00000270517ENST00000417981ENST00000585318ENST00000585898ENST00000588998ENST00000590480ENST00000591104ENST00000592312ENST00000592571ENSG00000130176ENST00000252456ENST00000535659ENST00000586059ENST00000586577ENST00000588935ENST00000592338ENST00000592923ENSG00000161914ENST00000293771ENST00000589051ENST00000590548ENSG00000213303ENST00000463278ENSG00000213304ENST00000483614ENSG00000244080ENST00000498758CIL_000767_0002ENSMUSG00000001349ENSMUST00000001384ENSMUSG00000066839ENSMUST00000098937ENSMUST00000177967ENSMUST00000179422ENSMUST00000180180ENSMUSG00000096981ENSMUST00000180419
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130159 ENST00000252440 6.838±0.00 N/A N/A N/A 6.753±0.00 11.087±0.00 12.631±0.00 N/A N/A N/A 16.274±0.00 N/A N/A N/A
ENST00000270517 5.626±0.00 10.966±0.00 1.452±0.00 8.027±0.00 5.690±4.18 15.859±0.00 18.072±13.43 15.230±0.00 7.584±6.01 0.312±0.00 15.471±13.25 26.190±13.17 11.767±3.41 16.218±7.97
ENST00000417981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.079±2.45 N/A
ENST00000585318 10.334±0.00 N/A N/A N/A N/A 7.864±5.10 2.229±0.00 4.162±0.00 1.070±0.00 12.524±0.00 12.117±1.16 N/A N/A N/A
ENST00000585898 10.424±0.00 N/A N/A N/A 6.807±5.57 20.930±0.00 N/A 3.875±0.00 1.806±0.00 N/A N/A N/A N/A 48.906±0.00
ENST00000586149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588998 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.758±0.00 N/A N/A N/A N/A
ENST00000590480 7.367±0.00 11.509±0.00 N/A N/A 9.101±0.00 N/A N/A 14.235±0.00 N/A N/A N/A N/A N/A N/A
ENST00000591104 N/A N/A N/A N/A 0.534±0.00 1.252±0.00 N/A N/A 1.030±0.00 N/A 6.388±0.00 0.839±0.00 N/A N/A
ENST00000591352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592312 N/A N/A 1.883±0.00 N/A N/A N/A N/A N/A N/A 0.405±0.00 N/A N/A N/A N/A
ENST00000592571 N/A 8.818±0.00 1.454±0.00 N/A N/A 1.408±0.00 17.170±0.00 11.694±5.14 12.329±0.00 8.288±5.88 10.011±0.00 11.783±6.04 N/A 13.090±0.00
ENST00000592665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130176 ENST00000252456 27.182±0.00 150.912±0.00 1.796±0.00 1.302±0.99 36.398±2.42 207.665±163.27 20.307±18.26 8.751±8.15 94.567±94.27 74.896±70.94 2.502±1.87 74.975±76.28 27.639±19.94 51.601±42.78
ENST00000535659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.217±0.00
ENST00000585869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586059 N/A N/A N/A 2.380±1.31 28.433±0.00 31.258±0.00 31.945±0.00 0.772±0.00 92.980±0.00 N/A 1.054±0.00 N/A N/A 15.554±0.00
ENST00000586577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.317±0.00 14.258±0.00
ENST00000587087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588935 22.844±0.00 168.374±0.00 N/A 5.598±0.00 42.453±0.00 574.903±0.00 N/A N/A 0.696±0.00 N/A N/A N/A N/A 175.786±0.00
ENST00000592338 N/A N/A N/A 0.575±0.00 N/A N/A 2.027±0.00 N/A N/A N/A 7.322±0.00 4.335±0.00 5.083±0.00 N/A
ENST00000592923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.733±0.00
ENSG00000161914 ENST00000293771 N/A N/A N/A N/A 0.304±0.00 N/A N/A N/A N/A N/A N/A 4.173±0.00 3.222±0.00 16.099±0.00
ENST00000588541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.930±0.00 N/A N/A
ENST00000590296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590548 N/A N/A N/A N/A N/A 0.526±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213303 ENST00000463278 N/A N/A N/A 0.405±0.00 0.606±0.00 0.035±0.00 N/A 0.186±0.00 0.118±0.08 0.314±0.00 0.137±0.00 0.413±0.00 0.143±0.00 0.070±0.00
ENSG00000213304 ENST00000483614 N/A 0.410±0.00 N/A 0.100±0.00 N/A N/A 0.194±0.00 N/A N/A N/A N/A 0.207±0.01 0.087±0.00 0.644±0.00
ENSG00000244080 ENST00000498758 N/A 0.182±0.00 N/A 0.067±0.00 0.063±0.00 N/A 0.115±0.00 N/A 0.274±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001349 ENSMUST00000001384 75.314±68.49 0.857±0.38 626.013±31.30 0.127±0.06 21.817±9.18 571.901±95.76 5.585±2.83 2.211±1.67 0.167±0.13 40.523±7.07 0.449±0.15 138.836±63.28 5.415±10.20 5.125±4.60
ENSMUSG00000066839 ENSMUST00000098937 10.827±1.56 12.252±2.34 8.528±0.78 6.330±1.34 11.769±2.33 9.507±1.81 23.931±1.74 25.722±2.46 10.024±4.87 5.766±1.02 23.810±3.18 8.825±1.88 4.151±0.17 9.389±1.41
ENSMUST00000177967 10.903±0.00 N/A N/A N/A 11.770±0.00 N/A 21.884±4.95 19.933±0.66 N/A 6.649±0.00 N/A N/A N/A 14.621±0.50
ENSMUST00000179422 N/A N/A N/A 6.004±0.00 N/A N/A N/A N/A N/A N/A 6.637±0.00 N/A 6.908±4.11 N/A
ENSMUST00000180180 8.879±2.35 18.252±3.09 8.530±1.02 7.620±1.51 9.717±2.66 9.757±1.22 21.048±3.91 26.069±2.44 11.669±5.58 6.686±1.36 23.154±4.73 8.750±2.96 4.555±1.85 8.259±2.49
ENSMUSG00000096981 ENSMUST00000180419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.976±0.00 N/A N/A

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