C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ECSIT signalling integrator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000270517 ECSIT-001 ENSG00000130159 9606 - 19:11505916-11529174 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000270517
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000270517 5.626±0.00 10.966±0.00 1.452±0.00 8.027±0.00 5.690±4.18 15.859±0.00 18.072±13.43 15.230±0.00 7.584±6.01 0.312±0.00 15.471±13.25 26.190±13.17 11.767±3.41 16.218±7.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000764 CIL_000764_0001 CGP 19:11483427-11529174
CIL_000767 CIL_000767_0001 CGP 19:11505916-11550323

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001707 IEA mesoderm formation
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0007178 IEA transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0016651 IDA oxidoreductase activity, acting on NAD(P)H
GO:0030509 IEA BMP signaling pathway
GO:0045087 IEA innate immune response
GO:0051341 IDA regulation of oxidoreductase activity
GO:0055114 IDA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179422 Ecsit-002 protein_coding Mus_musculus 0 894
ENSMUST00000098937 Ecsit-201 protein_coding Mus_musculus 0 865
ENSMUST00000180180 Ecsit-001 protein_coding Mus_musculus 0 865

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