C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 853
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180336 Zfp853-201 ENSMUSG00000093910 10090 - 5:143287755-143292356 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000180336
Transcript ID Adrenal Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000180336 0.481±0.05 0.847±0.68 0.085±0.03 0.127±0.04 0.227±0.20 0.043±0.01 0.023±0.01 1.172±0.89 0.078±0.05 0.032±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0002 VISTA 5:142700569-143309825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287461 ZNF689-001 protein_coding Homo_sapiens 0.0000004 62
ENST00000306562 ZNF672-001 protein_coding Homo_sapiens 0.0000000000009 81
ENST00000340042 GLI4-201 protein_coding Homo_sapiens 1e-17 95
ENST00000421812 ZNF697-001 protein_coding Homo_sapiens 9e-25 121
ENST00000457543 ZNF853-001 protein_coding Homo_sapiens 0 946
ENST00000517530 GLI4-010 protein_coding Homo_sapiens 3e-16 90
ENST00000522452 ZFP41-001 protein_coding Homo_sapiens 0.000000000000005 88
ENST00000523522 GLI4-001 protein_coding Homo_sapiens 1e-17 95
ENST00000523812 GLI4-002 processed_transcript Homo_sapiens 2e-17 95
ENST00000563304 ZNF689-003 processed_transcript Homo_sapiens 0.0000001 62
ENST00000564262 ZNF689-005 processed_transcript Homo_sapiens 0.00000008 62
ENST00000565440 ZNF689-006 processed_transcript Homo_sapiens 0.0000001 62
ENST00000566673 ZNF689-002 processed_transcript Homo_sapiens 0.0000002 62
ENST00000610935 ZNF787-001 protein_coding Homo_sapiens 0.000000000002 79
ENST00000611647 ZNF689-201 protein_coding Homo_sapiens 0.0000003 62

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