C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GLI family zinc finger 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523522 GLI4-001 ENSG00000250571 9606 + 8:143269358-143276931 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonPlacentaENST00000523522
Transcript ID Breast Colon Placenta
ENST00000523522 5.581±0.00 1.501±0.00 2.094±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185040 2810039B14Rik-006 unitary_pseudogene Mus_musculus 0 484
ENSMUST00000183928 2810039B14Rik-001 processed_transcript Mus_musculus 0 460
ENSMUST00000184938 2810039B14Rik-005 retained_intron Mus_musculus 0 329
ENSMUST00000184801 2810039B14Rik-002 processed_transcript Mus_musculus 1e-18 99
ENSMUST00000048854 Zfp647-201 protein_coding Mus_musculus 1e-18 99
ENSMUST00000180336 Zfp853-201 protein_coding Mus_musculus 1e-17 95
ENSMUST00000032802 Zfp84-001 protein_coding Mus_musculus 0.000000000005 77
ENSMUST00000095606 Zfp213-201 protein_coding Mus_musculus 0.00000000006 73
ENSMUST00000094870 Zfp787-201 protein_coding Mus_musculus 0.000000003 68
ENSMUST00000178162 Zfp790-202 protein_coding Mus_musculus 0.00000001 66
ENSMUST00000032796 Zfp790-201 protein_coding Mus_musculus 0.00000001 66
ENSMUST00000063918 Sp8-201 protein_coding Mus_musculus 0.00000001 66
ENSDART00000128406 BX324198.2-201 protein_coding Danio_rerio 0.0000001 62

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