C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GLI family zinc finger 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523812 GLI4-002 ENSG00000250571 9606 + 8:143274599-143276931 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungOvaryPlacentaENST00000523812
Transcript ID Adrenal Breast Lung Ovary Placenta
ENST00000523812 2.922±0.00 1.771±0.00 0.943±0.00 2.599±0.00 0.734±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185040 2810039B14Rik-006 unitary_pseudogene Mus_musculus 0 484
ENSMUST00000183928 2810039B14Rik-001 processed_transcript Mus_musculus 0 460
ENSMUST00000184938 2810039B14Rik-005 retained_intron Mus_musculus 0 329
ENSMUST00000184801 2810039B14Rik-002 processed_transcript Mus_musculus 2e-18 99
ENSMUST00000048854 Zfp647-201 protein_coding Mus_musculus 2e-18 99
ENSMUST00000180336 Zfp853-201 protein_coding Mus_musculus 2e-17 95
ENSMUST00000032802 Zfp84-001 protein_coding Mus_musculus 0.000000000009 77
ENSMUST00000095606 Zfp213-201 protein_coding Mus_musculus 0.0000000001 73
ENSMUST00000094870 Zfp787-201 protein_coding Mus_musculus 0.000000005 68
ENSMUST00000178162 Zfp790-202 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000032796 Zfp790-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000063918 Sp8-201 protein_coding Mus_musculus 0.00000002 66
ENSDART00000128406 BX324198.2-201 protein_coding Danio_rerio 0.0000003 62

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