C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180341 Hnrnpf-009 ENSMUSG00000042079 10090 + 6:117923701-117925622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryPlacentaTestisENSMUST00000180341
Transcript ID Brain Colon Ovary Placenta Testis
ENSMUST00000180341 9.140±0.00 9.971±0.84 26.403±9.31 54.280±24.26 46.273±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003727 ISS single-stranded RNA binding
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0043484 ISS regulation of RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337970 HNRNPF-004 protein_coding Homo_sapiens 0 2571
ENST00000356053 HNRNPF-005 protein_coding Homo_sapiens 0 2577
ENST00000357065 HNRNPF-001 protein_coding Homo_sapiens 0 2577
ENST00000443950 HNRNPF-201 protein_coding Homo_sapiens 0 2577
ENST00000477108 HNRNPF-003 processed_transcript Homo_sapiens 0 459
ENST00000498176 HNRNPF-002 processed_transcript Homo_sapiens 0 370
ENST00000544000 HNRNPF-202 protein_coding Homo_sapiens 0 2577

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