C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: schwannomin interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182006 Schip1-008 ENSMUSG00000027777 10090 + 3:68493491-68626231 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000182006
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000182006 0.942±0.42 0.338±0.00 3.217±0.00 11.166±4.51 0.854±0.39 0.883±0.00 0.278±0.06 1.966±0.00 2.485±1.21 3.600±2.20 0.775±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JS CIL_0004JS_0003 CGP 3:67892220-68626481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337808 IQCJ-SCHIP1-008 protein_coding Homo_sapiens 0 1993
ENST00000397832 IQCJ-002 protein_coding Homo_sapiens 0 466
ENST00000412423 IQCJ-SCHIP1-010 protein_coding Homo_sapiens 0 1195
ENST00000445224 SCHIP1-004 protein_coding Homo_sapiens 0 1195
ENST00000451172 IQCJ-001 protein_coding Homo_sapiens 0 464
ENST00000460298 IQCJ-SCHIP1-011 protein_coding Homo_sapiens 0 924
ENST00000461058 SCHIP1-011 retained_intron Homo_sapiens 0 322
ENST00000467377 IQCJ-SCHIP1-014 protein_coding Homo_sapiens 0 614
ENST00000467442 IQCJ-SCHIP1-006 processed_transcript Homo_sapiens 0 442
ENST00000471575 IQCJ-SCHIP1-009 protein_coding Homo_sapiens 0 449
ENST00000472451 IQCJ-SCHIP1-013 protein_coding Homo_sapiens 0 584
ENST00000472483 SCHIP1-014 retained_intron Homo_sapiens 0 621
ENST00000473061 IQCJ-SCHIP1-012 protein_coding Homo_sapiens 0 409
ENST00000476809 IQCJ-SCHIP1-002 protein_coding Homo_sapiens 0 1991
ENST00000481715 IQCJ-SCHIP1-004 protein_coding Homo_sapiens 0 603
ENST00000481796 IQCJ-004 processed_transcript Homo_sapiens 0 191
ENST00000482126 IQCJ-003 protein_coding Homo_sapiens 0 202
ENST00000482804 SCHIP1-005 protein_coding Homo_sapiens 0 1195
ENST00000482885 SCHIP1-006 retained_intron Homo_sapiens 0 322
ENST00000483486 IQCJ-SCHIP1-003 protein_coding Homo_sapiens 0 627
ENST00000485419 IQCJ-SCHIP1-001 protein_coding Homo_sapiens 0 2457
ENST00000488898 IQCJ-SCHIP1-005 protein_coding Homo_sapiens 0 473
ENST00000495954 SCHIP1-012 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000527095 IQCJ-SCHIP1-007 protein_coding Homo_sapiens 0 1197

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