C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: schwannomin interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027777 Schip1 10090 + 3:68064802-68626481 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029346 Schip1-002 68064802-68626464 protein_coding
  ENSMUST00000169909 Schip1-003 68064802-68626464 protein_coding
  ENSMUST00000170788 Schip1-001 68572245-68626464 protein_coding
  ENSMUST00000182006 Schip1-008 68493491-68626231 protein_coding
  ENSMUST00000182360 Schip1-006 68596175-68598163 retained_intron
  ENSMUST00000182532 Schip1-004 68468183-68626481 protein_coding
  ENSMUST00000182719 Schip1-009 68494208-68626463 protein_coding
  ENSMUST00000182997 Schip1-005 68584179-68626464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169909ENSMUST00000170788ENSMUST00000182006ENSMUST00000182360ENSMUST00000182532ENSMUST00000182719ENSMUST00000182997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169909 N/A N/A N/A N/A 11.384±0.00 N/A N/A N/A N/A N/A N/A 2.394±0.00 1.487±0.00 N/A
ENSMUST00000170788 0.700±0.16 1.268±0.20 N/A 25.450±6.33 0.988±0.18 1.928±0.33 N/A 1.834±0.34 0.118±0.00 8.977±1.05 N/A 1.199±0.68 N/A 0.917±0.35
ENSMUST00000182006 0.942±0.42 0.338±0.00 3.217±0.00 11.166±4.51 N/A 0.854±0.39 N/A 0.883±0.00 0.278±0.06 1.966±0.00 N/A 2.485±1.21 3.600±2.20 0.775±0.19
ENSMUST00000182360 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.01 N/A N/A N/A N/A N/A
ENSMUST00000182532 2.629±1.73 0.973±0.27 11.050±0.85 N/A 1.384±0.05 2.315±0.54 5.531±0.88 2.425±0.71 0.534±0.24 2.680±0.52 N/A 3.165±1.47 3.363±0.25 0.289±0.02
ENSMUST00000182719 2.234±0.58 0.676±0.19 6.047±0.47 6.834±0.00 0.760±0.28 1.092±0.24 N/A 1.699±0.43 0.373±0.12 4.063±0.75 4.491±0.55 1.506±1.07 2.890±1.25 0.421±0.05
ENSMUST00000182997 N/A N/A N/A N/A 1.501±0.24 N/A 27.906±5.45 N/A 0.242±0.05 N/A 33.489±3.88 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JS CIL_0004JS_0003 CGP 3:67892220-68626481

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035175 schip1 schwannomin interacting protein 1 protein_coding Danio_rerio
ENSG00000250588 IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough protein_coding Homo_sapiens

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