C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptic vesicle glycoprotein 2c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182289 Sv2c-002 ENSMUSG00000051111 10090 - 13:95975858-96088866 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000182289
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000182289 0.158±0.00 6.098±0.00 0.021±0.00 0.195±0.03 0.020±0.00 0.080±0.00 0.019±0.00 0.065±0.01 0.023±0.00 0.239±0.11 0.233±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007268 TAS synaptic transmission
GO:0008021 IDA synaptic vesicle
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000155158 sv2c-201 protein_coding Danio_rerio 0 496
ENSDART00000084024 sv2c-001 protein_coding Danio_rerio 0 355
ENST00000322285 SV2C-002 protein_coding Homo_sapiens 0 2481
ENST00000502798 SV2C-001 protein_coding Homo_sapiens 0 2483
ENST00000506257 SV2C-004 retained_intron Homo_sapiens 0 281

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