C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6773
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182377 Gm6773-001 ENSMUSG00000098079 10090 - 14:18099183-18100060 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungOvaryTestisENSMUST00000182377
Transcript ID Breast Lung Ovary Testis
ENSMUST00000182377 0.041±0.00 0.050±0.00 0.164±0.00 0.037±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 667
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 496
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 651
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 667
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 667
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 475
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 617
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 326
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 455
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 455
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 424
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 361
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 636
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 1e-19 102
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 496
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 496
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 571
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 344
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 272
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 588

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