C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403475 RP11-378G13.2-001 ENSG00000219951 9606 + 6:83392416-83393409 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverLungMuscleOvaryPlacentaTestisENST00000403475
Transcript ID Brain Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000403475 0.090±0.00 0.063±0.03 0.195±0.18 0.034±0.00 0.669±0.00 0.056±0.00 0.045±0.00 0.151±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000670 CIL_000670_0001 CGP 6:83193379-83431071
CIL_000625 CIL_000625_0002 CGP 6:83210389-83525704

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 959
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 959
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 953
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 953
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 953
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 953
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 946
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 944
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 942
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 942
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 942
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 937
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 937
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 937
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 937
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 931
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 931
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 928
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 926
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 922
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 920
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 911
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 911
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 909
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 909
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 909
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 902
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 898
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 894
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 880
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 867
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000182266 Gm2467-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 857
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 854
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 852
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 848
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 848
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 841
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 837
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 837
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 835
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 833
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 832
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 832
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 832
ENSMUST00000182661 Gm7251-001 processed_pseudogene Mus_musculus 0 830
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 826
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 822
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 822
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 809
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 802
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 800
ENSMUST00000121506 Gm5270-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000182599 Gm6967-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000181413 Gm6498-002 transcribed_processed_pseudogene Mus_musculus 0 787
ENSMUST00000182071 Gm9034-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000118148 Gm13592-001 processed_pseudogene Mus_musculus 0 778
ENSMUST00000118789 Gm6322-001 processed_pseudogene Mus_musculus 0 778
ENSMUST00000117318 Gm11453-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000122453 Gm12017-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000182150 Gm5210-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000182021 Gm4929-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000182449 Gm6944-001 processed_pseudogene Mus_musculus 0 771
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 767
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 750
ENSMUST00000182170 Gm4819-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000183076 Gm5345-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000182234 Gm4804-001 processed_pseudogene Mus_musculus 0 741
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000182995 Gm5335-001 processed_pseudogene Mus_musculus 0 736
ENSMUST00000120913 Gm11658-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000182369 Gm6283-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000081029 Gm6498-001 processed_transcript Mus_musculus 0 725
ENSMUST00000182757 Gm9658-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000182906 Gm8100-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000181978 Gm8927-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000182375 Gm8492-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000182707 Gm9061-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000182596 Gm5732-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000182847 Gm4812-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000190835 RP24-347J6.3-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000122085 Gm15593-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000118675 Gm12684-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000180794 Gm5976-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000182020 Gm7481-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000182941 Gm7583-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000120199 Gm12969-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000183064 Gm7497-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000180655 Gm5262-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000182724 Gm9149-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000183259 Gm8565-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000182201 Gm5300-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000182716 Gm6771-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000182237 Gm6946-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000182329 Gm7611-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000119692 Gm5760-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000184810 Gm11214-001 translated_processed_pseudogene Mus_musculus 0 665
ENSMUST00000182555 Gm8048-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000119237 Gm13668-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000182830 Gm8513-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000118792 Gm18859-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000122068 Gm11960-001 transcribed_processed_pseudogene Mus_musculus 0 647
ENSMUST00000181063 Gm11960-002 processed_transcript Mus_musculus 0 647
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 643
ENSMUST00000153034 Gm10364-001 transcribed_processed_pseudogene Mus_musculus 0 640
ENSMUST00000076633 Gm10364-002 processed_transcript Mus_musculus 0 640
ENSMUST00000122262 Gm6298-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000183230 Gm8709-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000182279 Gm4891-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000188558 RP23-337B16.2-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000182253 Gm5205-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000117214 Gm13870-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000182254 Gm9146-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000118688 Gm8661-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000183159 Gm6317-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000182857 Gm18822-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000182832 Gm7734-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000180769 Gm7784-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000121399 Gm14113-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000182928 Gm4960-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000181525 Gm5706-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000182028 Gm8919-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000182081 Gm9162-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000181982 Gm5342-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000182698 Gm4398-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000181115 Gm8357-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000183298 Gm8529-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000120728 Gm16177-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000106038 RP24-347J6.6-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000188041 RP24-347J6.4-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000182963 Gm9135-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000182730 Gm5272-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000182703 Gm26929-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000182641 Gm5274-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000187161 RP24-347J6.5-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000117538 Gm11996-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000182069 Gm18848-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000181691 Gm8321-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000183067 Gm9358-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000183151 Gm26977-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000181461 Gm2383-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000182377 Gm6773-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000144205 Gapdh-005 processed_transcript Mus_musculus 0 473
ENSMUST00000116649 Gm12419-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000182282 Gm17798-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000182990 Gm26970-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000182187 Gm21232-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000182616 Gm7572-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000184252 Gm11214-002 protein_coding Mus_musculus 0 425
ENSMUST00000182376 Gm26959-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000183221 Gm9192-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000182464 Gapdh-013 retained_intron Mus_musculus 0 398
ENSMUST00000183270 Gm17799-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000118983 Gm11447-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000118427 Gm12717-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000182807 Gm27043-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000180888 Gm9499-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000185454 RP24-255L24.1-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000159905 Gm16296-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000097296 Gm17199-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000161466 Gm16297-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000183320 Gm8167-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000147954 Gapdh-006 retained_intron Mus_musculus 0 291
ENSMUST00000182079 Gm15294-002 protein_coding Mus_musculus 0 279
ENSMUST00000182552 Gm27034-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000178571 RP24-542I6.2-001 processed_pseudogene Mus_musculus 0 222
ENSMUST00000182372 Gm27023-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000121919 Gm14491-001 processed_pseudogene Mus_musculus 5e-26 122
ENSMUST00000118210 Gm11550-001 processed_pseudogene Mus_musculus 2e-25 121

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