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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | predicted gene, 27034 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000182552  |
Gm27034-001 |
ENSMUSG00000098059 |
10090 | + |
14:98714813-98715752  |
processed_pseudogene |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007L7 | CIL_0007L7_0003 | UCNEbase | 14:96995185-98990071 |
| CIL_0004PD | CIL_0004PD_0003 | CGP | 14:97786853-99046136 |
| CIL_000827 | CIL_000827_0002 | VISTA | 14:98122637-98723400 |
| CIL_0009CF | CIL_0009CF_0002 | VISTA | 14:98148375-98750139 |
| CIL_0008QP | CIL_0008QP_0002 | VISTA | 14:98233924-98835402 |
| CIL_000959 | CIL_000959_0002 | VISTA | 14:98236184-98838781 |
| CIL_0008DO | CIL_0008DO_0002 | VISTA | 14:98383223-98984855 |
| CIL_0009CE | CIL_0009CE_0002 | VISTA | 14:98448098-99051239 |
| CIL_00095A | CIL_00095A_0002 | VISTA | 14:98465363-99066176 |
| CIL_00095B | CIL_00095B_0002 | VISTA | 14:98519484-99120234 |
| CIL_000955 | CIL_000955_0002 | VISTA | 14:98530064-99131289 |
| CIL_0009CH | CIL_0009CH_0002 | VISTA | 14:98532300-99134612 |
| CIL_0009CG | CIL_0009CG_0002 | VISTA | 14:98538461-99140576 |
| CIL_000956 | CIL_000956_0002 | VISTA | 14:98594511-99195418 |
| CIL_0009CJ | CIL_0009CJ_0002 | VISTA | 14:98658352-99259867 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000229239
|
GAPDH-001 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000396856
|
GAPDH-004 | protein_coding | Homo_sapiens | 0 | 255 |
|
ENST00000396858
|
GAPDH-008 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000396859
|
GAPDH-003 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000396861
|
GAPDH-002 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000403475
|
RP11-378G13.2-001 | processed_pseudogene | Homo_sapiens | 0 | 274 |
|
ENST00000419696
|
GAPDHP64-001 | processed_pseudogene | Homo_sapiens | 6e-25 | 119 |
|
ENST00000438477
|
GAPDHP58-001 | processed_pseudogene | Homo_sapiens | 0 | 281 |
|
ENST00000466588
|
GAPDH-005 | retained_intron | Homo_sapiens | 0 | 255 |
|
ENST00000474249
|
GAPDH-006 | retained_intron | Homo_sapiens | 0 | 255 |
|
ENST00000492719
|
GAPDH-011 | retained_intron | Homo_sapiens | 0 | 374 |
|
ENST00000507324
|
GAPDHP61-001 | processed_pseudogene | Homo_sapiens | 0 | 333 |
|
ENST00000511530
|
GAPDHP71-001 | processed_pseudogene | Homo_sapiens | 0 | 303 |
|
ENST00000619601
|
GAPDH-201 | protein_coding | Homo_sapiens | 0 | 351 |
