C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde-3-phosphate dehydrogenase pseudogene 71
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511530 GAPDHP71-001 ENSG00000213376 9606 + 5:174513305-174514307 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000511530
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000511530 0.052±0.00 0.037±0.00 0.099±0.00 0.077±0.00 0.053±0.00 0.072±0.02 0.093±0.00 0.063±0.00 0.017±0.00 0.136±0.00 0.059±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086T CIL_00086T_0001 VISTA 5:174433171-175034831

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 976
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 955
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 942
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 937
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 920
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 915
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 898
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 898
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 880
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 872
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 850
ENSMUST00000133495 3000002C10Rik-001 transcribed_processed_pseudogene Mus_musculus 0 832
ENSMUST00000125451 3000002C10Rik-003 processed_transcript Mus_musculus 0 832
ENSMUST00000144161 3000002C10Rik-002 processed_transcript Mus_musculus 0 832
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 821
ENSMUST00000182150 Gm5210-001 processed_pseudogene Mus_musculus 0 811
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 809
ENSMUST00000183076 Gm5345-001 processed_pseudogene Mus_musculus 0 800
ENSMUST00000182514 Gm9568-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000121506 Gm5270-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000182021 Gm4929-001 processed_pseudogene Mus_musculus 0 795
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 785
ENSMUST00000182369 Gm6283-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000182599 Gm6967-001 processed_pseudogene Mus_musculus 0 761
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000182954 Gm8318-001 processed_pseudogene Mus_musculus 0 747
ENSMUST00000118148 Gm13592-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000182201 Gm5300-001 processed_pseudogene Mus_musculus 0 741
ENSMUST00000183288 Gm7833-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000182906 Gm8100-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000182020 Gm7481-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000118730 Gm13326-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000122262 Gm6298-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000121385 Gm12464-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000182555 Gm8048-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000183230 Gm8709-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000183159 Gm6317-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000181525 Gm5706-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000119554 Gm9439-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000181691 Gm8321-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000182069 Gm18848-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000182552 Gm27034-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000121234 Gm13489-001 processed_pseudogene Mus_musculus 4e-17 94

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