C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: schwannomin interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182719 Schip1-009 ENSMUSG00000027777 10090 + 3:68494208-68626463 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182719
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182719 2.234±0.58 0.676±0.19 6.047±0.47 6.834±0.00 0.760±0.28 1.092±0.24 1.699±0.43 0.373±0.12 4.063±0.75 4.491±0.55 1.506±1.07 2.890±1.25 0.421±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JS CIL_0004JS_0003 CGP 3:67892220-68626481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337808 IQCJ-SCHIP1-008 protein_coding Homo_sapiens 0 1993
ENST00000412423 IQCJ-SCHIP1-010 protein_coding Homo_sapiens 0 1195
ENST00000445224 SCHIP1-004 protein_coding Homo_sapiens 0 1195
ENST00000460298 IQCJ-SCHIP1-011 protein_coding Homo_sapiens 0 924
ENST00000461058 SCHIP1-011 retained_intron Homo_sapiens 0 322
ENST00000467377 IQCJ-SCHIP1-014 protein_coding Homo_sapiens 0 614
ENST00000467442 IQCJ-SCHIP1-006 processed_transcript Homo_sapiens 0 239
ENST00000472451 IQCJ-SCHIP1-013 protein_coding Homo_sapiens 0 588
ENST00000472483 SCHIP1-014 retained_intron Homo_sapiens 0 621
ENST00000473061 IQCJ-SCHIP1-012 protein_coding Homo_sapiens 0 409
ENST00000476809 IQCJ-SCHIP1-002 protein_coding Homo_sapiens 0 1790
ENST00000481715 IQCJ-SCHIP1-004 protein_coding Homo_sapiens 0 399
ENST00000482804 SCHIP1-005 protein_coding Homo_sapiens 0 1195
ENST00000482885 SCHIP1-006 retained_intron Homo_sapiens 0 322
ENST00000483486 IQCJ-SCHIP1-003 protein_coding Homo_sapiens 0 255
ENST00000485419 IQCJ-SCHIP1-001 protein_coding Homo_sapiens 0 1993
ENST00000488898 IQCJ-SCHIP1-005 protein_coding Homo_sapiens 3e-21 106
ENST00000495954 SCHIP1-012 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000527095 IQCJ-SCHIP1-007 protein_coding Homo_sapiens 0 1197

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