C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family A member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182834 Plekha7-001 ENSMUSG00000045659 10090 - 7:116123493-116237776 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastLungMuscleOvaryENSMUST00000182834
Transcript ID Adipose Adrenal Bladder Brain Breast Lung Muscle Ovary
ENSMUST00000182834 0.488±0.00 2.257±0.59 0.933±0.00 0.561±0.00 0.466±0.00 0.639±0.00 0.084±0.01 1.317±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081X CIL_00081X_0002 VISTA 7:115524528-116125832
CIL_0008LR CIL_0008LR_0002 VISTA 7:115564594-116167473
CIL_000836 CIL_000836_0002 VISTA 7:115904293-116509702
CIL_0003ZQ CIL_0003ZQ_0002 CGP 7:116093301-116308376
CIL_0003ZX CIL_0003ZX_0002 CGP 7:116123493-116334190

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0005915 ISS zonula adherens
GO:0045218 ISS zonula adherens maintenance
GO:0070097 ISS delta-catenin binding
GO:0090136 ISS epithelial cell-cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110605 plekha7b-201 protein_coding Danio_rerio 0 255
ENST00000332954 PLEKHA7-005 processed_transcript Homo_sapiens 0 712
ENST00000355661 PLEKHA7-001 protein_coding Homo_sapiens 0 3393
ENST00000525781 PLEKHA7-004 retained_intron Homo_sapiens 0 2276
ENST00000528376 PLEKHA7-010 protein_coding Homo_sapiens 0 579
ENST00000528637 PLEKHA7-009 processed_transcript Homo_sapiens 0 243
ENST00000529049 PLEKHA7-017 processed_transcript Homo_sapiens 0 422
ENST00000529213 PLEKHA7-008 processed_transcript Homo_sapiens 0 372
ENST00000530489 PLEKHA7-003 protein_coding Homo_sapiens 0 2433
ENST00000531066 PLEKHA7-002 protein_coding Homo_sapiens 0 3930
ENST00000531776 PLEKHA7-006 retained_intron Homo_sapiens 0 340
ENST00000532079 PLEKHA7-007 protein_coding Homo_sapiens 0 363
ENST00000533251 PLEKHA7-015 retained_intron Homo_sapiens 0 189
ENST00000533901 PLEKHA7-016 processed_transcript Homo_sapiens 0 355

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