C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008LR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1301 VISTA 9606 11:16101723-16704491
GeneTranscriptPositionBiotype
ENSG00000110696 (C11orf58)
chromosome 11 open reading frame 58 		ENST00000228136 (C11orf58-001) 16738401-16756223 protein_coding
ENST00000524439 (C11orf58-004) 16738644-16754906 protein_coding
ENST00000524461 (C11orf58-002) 16746704-16755346 retained_intron
ENST00000524508 (C11orf58-009) 16756025-16756881 processed_transcript
ENST00000525106 (C11orf58-008) 16744236-16748196 retained_intron
ENST00000525256 (C11orf58-007) 16738659-16748591 retained_intron
ENST00000525684 (C11orf58-006) 16738658-16755067 protein_coding
ENST00000527893 (C11orf58-011) 16613132-16748421 processed_transcript
ENST00000528634 (C11orf58-005) 16738658-16754035 protein_coding
ENST00000531658 (C11orf58-003) 16749114-16755347 retained_intron
ENSG00000213785 (RP11-449L13.2)
 ENST00000525311 (RP11-449L13.2-001) 16484084-16484671 processed_pseudogene
ENSG00000241943 (RN7SL188P)
RNA, 7SL, cytoplasmic 188, pseudogene 		ENST00000469842 (RN7SL188P-201) 16576851-16577135 misc_RNA
CIL_0008LR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1301 VISTA 10090 7:115564594-116167473
GeneTranscriptPositionBiotype
ENSMUSG00000030663 (1110004F10Rik)
RIKEN cDNA 1110004F10 gene 		ENSMUST00000032899 (1110004F10Rik-001) 116093301-116105210 protein_coding
ENSMUST00000106607 (1110004F10Rik-002) 116093341-116105207 protein_coding
ENSMUST00000106608 (1110004F10Rik-004) 116093336-116104831 protein_coding
ENSMUST00000151254 (1110004F10Rik-003) 116093366-116105210 nonsense_mediated_decay
ENSMUSG00000030664 (Sox6os)
SRY (sex determining region Y)-box 6, opposite strand 		ENSMUST00000032900 (Sox6os-001) 116031979-116032550 antisense
ENSMUSG00000045659 (Plekha7)
pleckstrin homology domain containing, family A member 7 		ENSMUST00000084664 (Plekha7-004) 116124118-116189841 protein_coding
ENSMUST00000181981 (Plekha7-003) 116133791-116198561 protein_coding
ENSMUST00000181998 (Plekha7-007) 116123493-116308376 protein_coding
ENSMUST00000182312 (Plekha7-013) 116176950-116180676 retained_intron
ENSMUST00000182443 (Plekha7-006) 116126029-116189327 retained_intron
ENSMUST00000182487 (Plekha7-010) 116134933-116308355 protein_coding
ENSMUST00000182511 (Plekha7-005) 116133795-116189604 protein_coding
ENSMUST00000182549 (Plekha7-012) 116164463-116184518 processed_transcript
ENSMUST00000182693 (Plekha7-011) 116170824-116187000 processed_transcript
ENSMUST00000182834 (Plekha7-001) 116123493-116237776 protein_coding
ENSMUST00000182890 (Plekha7-009) 116176904-116308050 retained_intron
ENSMUST00000183057 (Plekha7-008) 116175730-116308241 protein_coding
ENSMUST00000183281 (Plekha7-014) 116142735-116157892 protein_coding
ENSMUST00000183308 (Plekha7-002) 116156069-116237666 retained_intron
ENSMUSG00000051910 (Sox6)
SRY (sex determining region Y)-box 6 		ENSMUST00000072804 (Sox6-201) 115471344-115995086 protein_coding
ENSMUST00000106612 (Sox6-202) 115471344-116031047 protein_coding
ENSMUST00000166207 (Sox6-203) 115476658-115846105 protein_coding
ENSMUST00000166877 (Sox6-204) 115471344-116038744 protein_coding
ENSMUST00000169129 (Sox6-205) 115474475-115824707 protein_coding
ENSMUSG00000087621 (1700003G18Rik)
RIKEN cDNA 1700003G18 gene 		ENSMUST00000140689 (1700003G18Rik-001) 116081759-116093142 processed_transcript
ENSMUST00000150518 (1700003G18Rik-002) 116081898-116093106 processed_transcript
ENSMUSG00000091900 (Gm4353)
predicted gene 4353 		ENSMUST00000111755 (Gm4353-201) 116082863-116084635 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008LR_0001ENSG00000110696ENST00000228136ENST00000524439ENST00000524461ENST00000524508ENST00000525106ENST00000525256ENST00000525684ENST00000527893ENST00000528634ENST00000531658ENSG00000213785ENST00000525311ENSG00000241943ENST00000469842CIL_0008LR_0002ENSMUSG00000030663ENSMUST00000032899ENSMUST00000106607ENSMUST00000106608ENSMUST00000151254ENSMUSG00000030664ENSMUST00000032900ENSMUSG00000045659ENSMUST00000084664ENSMUST00000181981ENSMUST00000181998ENSMUST00000182312ENSMUST00000182443ENSMUST00000182487ENSMUST00000182511ENSMUST00000182549ENSMUST00000182693ENSMUST00000182834ENSMUST00000182890ENSMUST00000183057ENSMUST00000183281ENSMUST00000183308ENSMUSG00000051910ENSMUST00000072804ENSMUST00000106612ENSMUST00000166207ENSMUST00000166877ENSMUST00000169129ENSMUSG00000087621ENSMUST00000140689ENSMUST00000150518ENSMUSG00000091900ENSMUST00000111755
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008LR_0001ENSG00000110696ENST00000228136ENST00000524439ENST00000525684ENST00000531658ENSG00000213785ENST00000525311ENSG00000241943ENST00000469842CIL_0008LR_0002ENSMUSG00000030663ENSMUST00000032899ENSMUST00000106607ENSMUST00000106608ENSMUST00000151254ENSMUSG00000030664ENSMUST00000032900ENSMUSG00000045659ENSMUST00000084664ENSMUST00000181981ENSMUST00000181998ENSMUST00000182443ENSMUST00000182487ENSMUST00000182511ENSMUST00000182834ENSMUST00000183308ENSMUSG00000051910ENSMUST00000072804ENSMUST00000106612ENSMUST00000166207ENSMUST00000166877ENSMUST00000169129ENSMUSG00000087621ENSMUST00000140689ENSMUST00000150518ENSMUSG00000091900ENSMUST00000111755
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110696 ENST00000228136 26.710±0.00 25.642±0.00 20.780±0.00 42.210±14.51 26.596±0.89 30.940±7.53 24.441±1.51 27.995±0.86 26.003±11.59 26.457±1.65 12.264±0.57 41.426±6.62 31.826±4.34 41.774±1.24
ENST00000524439 84.488±0.00 N/A N/A N/A N/A N/A N/A 52.382±0.00 N/A N/A N/A 113.683±0.00 147.721±0.00 154.971±0.00
ENST00000524461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525684 N/A N/A 33.111±0.00 87.078±0.00 N/A 28.827±0.00 N/A 22.208±0.00 41.588±0.00 40.417±15.49 N/A 34.924±0.00 35.654±0.00 42.250±0.00
ENST00000527893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531658 N/A N/A N/A N/A 5.707±0.00 N/A N/A N/A N/A 4.684±0.00 N/A N/A N/A N/A
ENSG00000213785 ENST00000525311 N/A N/A 0.103±0.00 N/A N/A 0.312±0.00 0.056±0.00 0.031±0.00 N/A N/A 0.026±0.00 N/A N/A 0.167±0.00
ENSG00000241943 ENST00000469842 N/A N/A 1.071±0.00 N/A N/A 0.507±0.00 N/A N/A N/A N/A N/A N/A N/A 0.137±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030663 ENSMUST00000032899 19.162±1.00 30.683±1.17 40.605±3.57 56.650±32.73 20.769±0.89 20.420±2.25 16.938±4.58 26.496±1.25 33.516±13.19 25.867±3.85 18.310±1.49 28.790±6.92 37.608±15.59 20.696±6.71
ENSMUST00000106607 7.711±1.36 N/A N/A N/A 34.565±0.00 N/A 4.879±1.51 5.041±0.00 7.014±0.00 9.369±0.39 N/A 22.970±0.00 N/A N/A
ENSMUST00000106608 N/A N/A N/A 40.047±0.00 N/A N/A N/A N/A N/A N/A 3.244±0.00 28.476±19.76 45.730±7.15 51.670±0.00
ENSMUST00000151254 N/A N/A N/A N/A N/A N/A 2.133±0.00 N/A N/A N/A N/A 10.092±0.00 N/A 3.278±0.27
ENSMUSG00000030664 ENSMUST00000032900 12.533±6.69 1.714±0.71 1.232±0.25 0.116±0.05 10.032±1.38 0.388±0.28 1.230±0.58 2.473±0.58 1.677±1.39 0.933±0.58 4.266±1.05 1.053±0.33 0.232±0.00 0.116±0.00
ENSMUSG00000045659 ENSMUST00000084664 N/A 1.580±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.00 1.414±0.32 7.949±0.00 0.754±0.00
ENSMUST00000181981 0.472±0.11 N/A 2.358±0.49 N/A N/A N/A N/A N/A N/A 1.074±0.00 0.211±0.06 N/A 7.449±4.83 N/A
ENSMUST00000181998 0.831±0.47 2.667±0.80 3.008±0.05 1.606±0.41 1.001±0.43 9.004±2.01 1.040±0.06 8.068±2.14 0.915±0.31 1.066±0.32 0.031±0.00 2.461±0.75 8.277±0.68 0.942±0.51
ENSMUST00000182312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182443 0.365±0.02 N/A 0.873±0.00 0.878±0.13 0.398±0.09 4.165±0.60 N/A N/A 0.197±0.03 N/A 0.041±0.02 0.799±0.12 1.120±0.00 0.278±0.05
ENSMUST00000182487 0.721±0.00 N/A N/A N/A N/A 4.020±0.06 N/A N/A N/A N/A N/A 2.126±0.00 N/A N/A
ENSMUST00000182511 N/A 4.933±0.59 N/A 0.834±0.00 1.884±0.00 3.887±0.13 1.668±0.00 3.842±0.00 0.338±0.08 1.128±0.00 0.203±0.02 N/A 11.563±6.82 N/A
ENSMUST00000182549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182834 0.488±0.00 2.257±0.59 0.933±0.00 0.561±0.00 0.466±0.00 N/A N/A N/A N/A 0.639±0.00 0.084±0.01 1.317±0.18 N/A N/A
ENSMUST00000182890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.313±0.01
ENSMUSG00000051910 ENSMUST00000072804 N/A N/A N/A 0.865±0.00 N/A 0.238±0.08 N/A N/A 1.960±0.00 0.143±0.00 N/A 0.319±0.13 0.168±0.00 N/A
ENSMUST00000106612 N/A N/A N/A 0.557±0.00 0.188±0.00 N/A N/A N/A 0.735±0.32 0.077±0.00 N/A 0.355±0.00 N/A N/A
ENSMUST00000166207 N/A N/A N/A 2.003±0.00 N/A N/A N/A N/A N/A N/A N/A 0.368±0.25 0.240±0.00 16.894±16.22
ENSMUST00000166877 0.220±0.00 0.139±0.03 N/A 4.308±0.00 N/A 0.208±0.00 N/A N/A 5.011±0.00 0.103±0.00 N/A 0.348±0.03 0.186±0.13 1.958±0.41
ENSMUST00000169129 N/A 0.291±0.03 N/A N/A N/A N/A N/A N/A 0.338±0.00 N/A N/A 0.123±0.00 0.073±0.00 N/A
ENSMUSG00000087621 ENSMUST00000140689 0.076±0.00 0.270±0.01 0.039±0.02 0.034±0.00 N/A 0.203±0.00 N/A N/A 0.077±0.09 N/A N/A 0.174±0.00 0.123±0.11 10.147±5.97
ENSMUST00000150518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.21 13.239±0.00
ENSMUSG00000091900 ENSMUST00000111755 0.394±0.08 0.603±0.09 0.170±0.06 0.636±0.32 0.480±0.11 0.402±0.15 0.168±0.04 0.267±0.13 0.241±0.16 0.299±0.11 0.063±0.03 0.722±0.38 1.399±1.77 1.039±0.16

Loading