C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ZX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166689-ENSG00000110700 CGP 9606 11:16778295-17077787
GeneTranscriptPositionBiotype
ENSG00000011405 (PIK3C2A)
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 		ENST00000265970 (PIK3C2A-001) 17086572-17169741 protein_coding
ENST00000503729 (PIK3C2A-004) 17194394-17207983 processed_transcript
ENST00000531428 (PIK3C2A-003) 17077730-17207920 processed_transcript
ENST00000532035 (PIK3C2A-005) 17169352-17207950 protein_coding
ENST00000533645 (PIK3C2A-002) 17141322-17207947 nonsense_mediated_decay
ENSG00000110700 (RPS13)
ribosomal protein S13 		ENST00000228140 (RPS13-010) 17074389-17077666 protein_coding
ENST00000525634 (RPS13-001) 17074389-17077787 protein_coding
ENST00000525828 (RPS13-005) 17074393-17077668 retained_intron
ENST00000526895 (RPS13-002) 17074389-17077706 processed_transcript
ENST00000527571 (RPS13-006) 17076709-17077667 retained_intron
ENST00000528074 (RPS13-004) 17076955-17077678 retained_intron
ENST00000531008 (RPS13-009) 17074389-17075612 retained_intron
ENST00000531908 (RPS13-008) 17074389-17076020 retained_intron
ENST00000533969 (RPS13-007) 17075531-17077647 protein_coding
ENST00000534329 (RPS13-003) 17076825-17077715 retained_intron
ENSG00000166689 (PLEKHA7)
pleckstrin homology domain containing, family A member 7 		ENST00000332954 (PLEKHA7-005) 16787660-16791728 processed_transcript
ENST00000355661 (PLEKHA7-001) 16787484-17014412 protein_coding
ENST00000525049 (PLEKHA7-011) 16801016-16813315 retained_intron
ENST00000525177 (PLEKHA7-014) 16791171-16795323 retained_intron
ENST00000525581 (PLEKHA7-012) 16794963-16812483 protein_coding
ENST00000525781 (PLEKHA7-004) 16788815-16817415 retained_intron
ENST00000528376 (PLEKHA7-010) 16851198-16881358 protein_coding
ENST00000528637 (PLEKHA7-009) 16854889-16881619 processed_transcript
ENST00000529049 (PLEKHA7-017) 16781023-16786366 processed_transcript
ENST00000529213 (PLEKHA7-008) 16854894-17013342 processed_transcript
ENST00000530489 (PLEKHA7-003) 16787660-16826354 protein_coding
ENST00000531066 (PLEKHA7-002) 16778295-17014443 protein_coding
ENST00000531079 (PLEKHA7-013) 16801025-16803533 retained_intron
ENST00000531776 (PLEKHA7-006) 16787660-16791345 retained_intron
ENST00000532079 (PLEKHA7-007) 16788983-17014412 protein_coding
ENST00000533251 (PLEKHA7-015) 16789268-16790095 retained_intron
ENST00000533901 (PLEKHA7-016) 16786293-16789857 processed_transcript
ENSG00000184669 (OR7E14P)
olfactory receptor, family 7, subfamily E, member 14 pseudogene 		ENST00000526721 (OR7E14P-001) 17052025-17053024 transcribed_unprocessed_pseudogene
ENST00000530490 (OR7E14P-002) 17013998-17052658 processed_transcript
ENSG00000199883 (RN7SKP90)
RNA, 7SK small nuclear pseudogene 90 		ENST00000363013 (RN7SKP90-201) 16842253-16842587 misc_RNA
ENSG00000244398 (RP11-466H18.1)
 ENST00000459748 (RP11-466H18.1-001) 16974693-16975013 processed_pseudogene
ENSG00000272034 (SNORD14A)
small nucleolar RNA, C/D box 14A 		ENST00000606526 (SNORD14A-201) 17074654-17074744 snoRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003ZX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045659-ENSMUSG00000090862 CGP 10090 7:116123493-116334190
GeneTranscriptPositionBiotype
ENSMUSG00000045659 (Plekha7)
pleckstrin homology domain containing, family A member 7 		ENSMUST00000084664 (Plekha7-004) 116124118-116189841 protein_coding
ENSMUST00000181981 (Plekha7-003) 116133791-116198561 protein_coding
ENSMUST00000181998 (Plekha7-007) 116123493-116308376 protein_coding
ENSMUST00000182312 (Plekha7-013) 116176950-116180676 retained_intron
ENSMUST00000182443 (Plekha7-006) 116126029-116189327 retained_intron
ENSMUST00000182487 (Plekha7-010) 116134933-116308355 protein_coding
ENSMUST00000182511 (Plekha7-005) 116133795-116189604 protein_coding
ENSMUST00000182549 (Plekha7-012) 116164463-116184518 processed_transcript
ENSMUST00000182693 (Plekha7-011) 116170824-116187000 processed_transcript
ENSMUST00000182834 (Plekha7-001) 116123493-116237776 protein_coding
ENSMUST00000182890 (Plekha7-009) 116176904-116308050 retained_intron
ENSMUST00000183057 (Plekha7-008) 116175730-116308241 protein_coding
ENSMUST00000183281 (Plekha7-014) 116142735-116157892 protein_coding
ENSMUST00000183308 (Plekha7-002) 116156069-116237666 retained_intron
ENSMUSG00000064741 (Snord14a)
small nucleolar RNA, C/D box 14A 		ENSMUST00000082807 (Snord14a-201) 116333171-116333257 snoRNA
ENSMUSG00000090862 (Rps13)
ribosomal protein S13 		ENSMUST00000170953 (Rps13-201) 116331507-116334190 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZX_0001ENSG00000011405ENST00000265970ENST00000503729ENST00000531428ENST00000532035ENST00000533645ENSG00000110700ENST00000228140ENST00000525634ENST00000525828ENST00000526895ENST00000527571ENST00000528074ENST00000531008ENST00000531908ENST00000533969ENST00000534329ENSG00000166689ENST00000332954ENST00000355661ENST00000525049ENST00000525177ENST00000525581ENST00000525781ENST00000528376ENST00000528637ENST00000529049ENST00000529213ENST00000530489ENST00000531066ENST00000531079ENST00000531776ENST00000532079ENST00000533251ENST00000533901ENSG00000184669ENST00000526721ENST00000530490ENSG00000199883ENST00000363013ENSG00000244398ENST00000459748ENSG00000272034ENST00000606526CIL_0003ZX_0002ENSMUSG00000045659ENSMUST00000084664ENSMUST00000181981ENSMUST00000181998ENSMUST00000182312ENSMUST00000182443ENSMUST00000182487ENSMUST00000182511ENSMUST00000182549ENSMUST00000182693ENSMUST00000182834ENSMUST00000182890ENSMUST00000183057ENSMUST00000183281ENSMUST00000183308ENSMUSG00000064741ENSMUST00000082807ENSMUSG00000090862ENSMUST00000170953
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZX_0001ENSG00000011405ENST00000265970ENSG00000110700ENST00000228140ENST00000525634ENST00000526895ENSG00000166689ENST00000332954ENST00000355661ENST00000525049ENST00000525177ENST00000525581ENST00000525781ENST00000530489ENST00000531066ENST00000531079ENST00000531776ENSG00000184669ENST00000526721ENST00000530490ENSG00000199883ENST00000363013ENSG00000244398ENST00000459748ENSG00000272034ENST00000606526CIL_0003ZX_0002ENSMUSG00000045659ENSMUST00000084664ENSMUST00000181981ENSMUST00000181998ENSMUST00000182443ENSMUST00000182487ENSMUST00000182511ENSMUST00000182834ENSMUST00000183308ENSMUSG00000064741ENSMUST00000082807ENSMUSG00000090862ENSMUST00000170953
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000011405 ENST00000265970 5.904±0.00 7.083±0.00 N/A 6.072±0.00 4.875±0.00 5.051±0.00 5.327±0.00 9.600±0.00 3.049±0.00 7.780±0.00 0.995±0.00 5.127±0.05 3.587±0.00 7.693±0.18
ENST00000503729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000110700 ENST00000228140 198.132±0.00 272.482±0.00 N/A 106.411±0.00 197.760±0.00 278.828±0.00 N/A 103.716±0.00 N/A N/A N/A 168.986±0.00 N/A 183.460±0.00
ENST00000525634 158.529±0.00 190.486±0.00 N/A 45.730±20.38 104.579±44.67 168.662±109.47 118.218±94.04 135.731±91.03 165.739±83.47 320.043±264.54 310.815±233.65 316.884±303.86 433.968±216.25 116.140±53.06
ENST00000525828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 373.077±77.68 275.713±46.40 N/A
ENST00000527571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166689 ENST00000332954 N/A 1.106±0.00 N/A N/A N/A N/A N/A 1.029±0.00 1.314±0.00 1.191±0.00 0.336±0.00 2.408±1.15 1.969±0.29 N/A
ENST00000355661 N/A N/A 1.678±0.00 0.801±0.56 0.944±0.00 0.856±0.21 0.392±0.00 N/A 0.336±0.00 N/A 0.112±0.00 0.890±0.00 1.164±0.00 N/A
ENST00000525049 N/A N/A N/A 1.179±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525177 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.207±0.00 N/A N/A N/A N/A
ENST00000525581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.070±0.00 11.806±0.00 11.034±0.00
ENST00000525781 N/A N/A N/A N/A N/A 1.085±0.00 N/A N/A N/A N/A N/A 0.898±0.00 N/A N/A
ENST00000528376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530489 1.048±0.00 N/A N/A 0.789±0.54 0.653±0.00 0.880±0.00 1.464±0.00 2.713±0.00 1.130±0.00 1.409±0.00 0.389±0.00 1.705±1.01 1.452±0.25 1.689±0.05
ENST00000531066 0.991±0.00 0.946±0.00 N/A N/A 0.522±0.00 1.622±0.00 0.207±0.00 0.518±0.00 0.448±0.00 0.716±0.44 N/A 2.103±1.21 1.614±0.90 2.021±0.62
ENST00000531079 N/A N/A N/A N/A N/A N/A N/A 2.084±0.00 N/A N/A N/A N/A N/A N/A
ENST00000531776 N/A N/A N/A N/A N/A 0.913±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184669 ENST00000526721 N/A N/A N/A N/A N/A N/A N/A 2.018±0.00 N/A N/A N/A N/A N/A N/A
ENST00000530490 N/A N/A N/A N/A N/A N/A N/A N/A 3.249±0.00 N/A N/A N/A N/A N/A
ENSG00000199883 ENST00000363013 0.174±0.00 0.123±0.00 0.222±0.00 N/A 0.235±0.04 0.389±0.00 0.055±0.00 N/A N/A 0.484±0.00 0.332±0.00 N/A N/A 0.111±0.00
ENSG00000244398 ENST00000459748 0.105±0.00 N/A 1.622±0.00 12.447±0.00 15.361±0.00 12.485±0.00 4.487±0.00 7.347±0.00 18.041±0.00 12.962±0.00 6.839±0.00 15.075±11.92 N/A N/A
ENSG00000272034 ENST00000606526 0.265±0.00 8.164±0.00 N/A 2.516±0.00 1.871±0.00 1.938±0.00 1.170±0.00 1.283±0.00 0.930±0.00 4.533±0.00 N/A 71.632±70.42 N/A 0.987±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045659 ENSMUST00000084664 N/A 1.580±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.00 1.414±0.32 7.949±0.00 0.754±0.00
ENSMUST00000181981 0.472±0.11 N/A 2.358±0.49 N/A N/A N/A N/A N/A N/A 1.074±0.00 0.211±0.06 N/A 7.449±4.83 N/A
ENSMUST00000181998 0.831±0.47 2.667±0.80 3.008±0.05 1.606±0.41 1.001±0.43 9.004±2.01 1.040±0.06 8.068±2.14 0.915±0.31 1.066±0.32 0.031±0.00 2.461±0.75 8.277±0.68 0.942±0.51
ENSMUST00000182312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182443 0.365±0.02 N/A 0.873±0.00 0.878±0.13 0.398±0.09 4.165±0.60 N/A N/A 0.197±0.03 N/A 0.041±0.02 0.799±0.12 1.120±0.00 0.278±0.05
ENSMUST00000182487 0.721±0.00 N/A N/A N/A N/A 4.020±0.06 N/A N/A N/A N/A N/A 2.126±0.00 N/A N/A
ENSMUST00000182511 N/A 4.933±0.59 N/A 0.834±0.00 1.884±0.00 3.887±0.13 1.668±0.00 3.842±0.00 0.338±0.08 1.128±0.00 0.203±0.02 N/A 11.563±6.82 N/A
ENSMUST00000182549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182834 0.488±0.00 2.257±0.59 0.933±0.00 0.561±0.00 0.466±0.00 N/A N/A N/A N/A 0.639±0.00 0.084±0.01 1.317±0.18 N/A N/A
ENSMUST00000182890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.313±0.01
ENSMUSG00000064741 ENSMUST00000082807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 245.060±0.00 222.669±72.09 125.008±0.00
ENSMUSG00000090862 ENSMUST00000170953 156.952±60.52 99.598±10.63 531.173±34.59 205.697±127.59 267.808±88.40 331.103±36.41 158.458±42.43 244.880±24.55 313.593±200.67 218.667±46.47 172.143±17.33 276.101±72.98 362.712±202.34 236.675±116.94

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