C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182892 Pcmtd1-004 ENSMUSG00000051285 10090 + 1:7160085-7172618 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000182892
Transcript ID Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000182892 3.262±0.07 2.730±0.29 1.589±0.48 1.739±0.76 3.464±2.36 1.572±0.00 2.441±1.16 0.901±0.32 0.439±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053O CIL_00053O_0002 CGP 1:6487231-7173628
CIL_00053R CIL_00053R_0002 CGP 1:7088920-9299878

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360540 PCMTD1-002 protein_coding Homo_sapiens 0 1138
ENST00000451824 PCMTD1P3-001 processed_pseudogene Homo_sapiens 0 490
ENST00000455560 PCMTD1P1-001 unprocessed_pseudogene Homo_sapiens 0 431
ENST00000519554 PCMTD1-007 protein_coding Homo_sapiens 0 399
ENST00000519559 PCMTD1-003 processed_transcript Homo_sapiens 0 1000
ENST00000522514 PCMTD1-001 protein_coding Homo_sapiens 0 904
ENST00000544451 PCMTD1-201 protein_coding Homo_sapiens 0 1140
ENST00000565017 PCMTD1P2-001 processed_pseudogene Homo_sapiens 0 424

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