C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4960
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182928 Gm4960-001 ENSMUSG00000098077 10090 - 5:7399362-7400362 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000182928
Transcript ID Adipose Bladder Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000182928 0.059±0.00 0.008±0.00 0.038±0.00 0.030±0.00 0.015±0.00 0.039±0.00 0.125±0.00 0.005±0.00 0.034±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 837
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 219
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 822
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 837
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 837
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 597
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 773
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 689
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 673
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 372
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 219
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 219
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 219
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 551
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 575
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 652
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 209
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 689
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 555

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