C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 68
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434621 GAPDHP68-001 ENSG00000233876 9606 + 7:9614978-9615985 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000434621
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000434621 0.015±0.00 0.053±0.00 0.101±0.00 0.031±0.00 0.028±0.00 0.049±0.00 0.014±0.00 0.074±0.00 0.539±0.00 0.081±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022P CIL_00022P_0001 CGP 7:8433955-10940256

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 946
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 944
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 939
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 918
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 907
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 902
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 902
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 898
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 885
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 880
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 857
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 857
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 846
ENSMUST00000133495 3000002C10Rik-001 transcribed_processed_pseudogene Mus_musculus 0 843
ENSMUST00000125451 3000002C10Rik-003 processed_transcript Mus_musculus 0 843
ENSMUST00000144161 3000002C10Rik-002 processed_transcript Mus_musculus 0 843
ENSMUST00000182661 Gm7251-001 processed_pseudogene Mus_musculus 0 841
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 815
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 813
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 809
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 795
ENSMUST00000182021 Gm4929-001 processed_pseudogene Mus_musculus 0 771
ENSMUST00000182369 Gm6283-001 processed_pseudogene Mus_musculus 0 761
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000182150 Gm5210-001 processed_pseudogene Mus_musculus 0 752
ENSMUST00000183288 Gm7833-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000190835 RP24-347J6.3-001 processed_pseudogene Mus_musculus 0 741
ENSMUST00000182757 Gm9658-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000182724 Gm9149-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000182954 Gm8318-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000182234 Gm4804-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000182906 Gm8100-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000180794 Gm5976-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000120199 Gm12969-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000121923 Gm4908-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000180769 Gm7784-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000182237 Gm6946-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000182928 Gm4960-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000182279 Gm4891-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000182830 Gm8513-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000119692 Gm5760-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000182555 Gm8048-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000182176 Gm26956-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000181990 Gm4823-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000119237 Gm13668-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000182628 Gm26937-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000183205 Gm7627-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000183322 Gm9621-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000122032 Gm7150-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000117214 Gm13870-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000121399 Gm14113-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000184486 Gm12117-001 translated_processed_pseudogene Mus_musculus 0 608
ENSMUST00000183298 Gm8529-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000182220 Gm7763-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000180795 Gm26587-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000182703 Gm26929-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000120728 Gm16177-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000182069 Gm18848-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000117538 Gm11996-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000182302 Gm7132-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000182187 Gm21232-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000182468 Gm7656-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000120311 Gm12266-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000182391 Gm26913-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000181201 Gm7713-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000182528 Gm8614-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000182466 Gm17800-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000182326 Gm8254-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000118893 Gm15957-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000183831 Gm12117-002 protein_coding Mus_musculus 0 357
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000161466 Gm16297-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000097296 Gm17199-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000120406 Gm15554-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000119811 Gm7189-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000074758 Gapdhs-003 protein_coding Mus_musculus 0 252
ENSMUST00000182634 Gapdhs-001 protein_coding Mus_musculus 0 252
ENSMUST00000118859 Gm12719-001 processed_pseudogene Mus_musculus 1.4013e-45 187
ENSMUST00000117238 Gm13761-001 processed_pseudogene Mus_musculus 5e-36 156
ENSMUST00000182067 Gapdhs-002 nonsense_mediated_decay Mus_musculus 2e-35 154

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