C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neural precursor cell expressed, developmentally down-regulated 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183375 Nedd4-006 ENSMUSG00000032216 10090 + 9:72662487-72712229 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U3 CIL_0004U3_0002 CGP 9:72662346-72917291

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000151 IPI ubiquitin ligase complex
GO:0002250 IMP adaptive immune response
GO:0003151 IGI outflow tract morphogenesis
GO:0003197 IGI endocardial cushion development
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IBA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0006513 IDA protein monoubiquitination
GO:0007528 IMP neuromuscular junction development
GO:0010766 IDA negative regulation of sodium ion transport
GO:0016020 IDA membrane
GO:0016567 IDA protein ubiquitination
GO:0019871 IDA sodium channel inhibitor activity
GO:0042110 IMP T cell activation
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0045732 IDA positive regulation of protein catabolic process
GO:0048514 IGI blood vessel morphogenesis
GO:0050807 IMP regulation of synapse organization
GO:0070064 IPI proline-rich region binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000435532 NEDD4-006 protein_coding Homo_sapiens 0 270
ENST00000502612 NEDD4-009 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000503468 NEDD4-005 nonsense_mediated_decay Homo_sapiens 1e-19 104
ENST00000506154 NEDD4-003 protein_coding Homo_sapiens 0 270
ENST00000507063 NEDD4-007 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000508342 NEDD4-002 protein_coding Homo_sapiens 0 270
ENST00000508871 NEDD4-004 protein_coding Homo_sapiens 0 198
ENST00000514893 NEDD4-011 processed_transcript Homo_sapiens 0 270

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