C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: trichorhinophalangeal syndrome I (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183421 Trps1-006 ENSMUSG00000038679 10090 - 15:50819499-50827521 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000183421
Transcript ID Liver
ENSMUST00000183421 0.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RP CIL_0005RP_0002 CGP 15:47580637-50890463
CIL_00097I CIL_00097I_0002 VISTA 15:50364833-50966650
CIL_0005RQ CIL_0005RQ_0002 CGP 15:50654752-51865481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002062 IGI chondrocyte differentiation
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007178 IGI transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0031063 IEA regulation of histone deacetylation
GO:0032330 IEA regulation of chondrocyte differentiation
GO:0045892 IPI negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:1902043 IGI positive regulation of extrinsic apoptotic signaling pathway via death domain receptors

Homologs

No Homologs available.

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