C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synergin, gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183456 Synrg-009 ENSMUSG00000034940 10090 + 11:83964476-84040928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastLiverMuscleOvaryPlacentaENSMUST00000183456
Transcript ID Adipose Bladder Breast Liver Muscle Ovary Placenta
ENSMUST00000183456 2.105±0.18 1.657±0.00 1.799±0.26 0.896±0.27 2.241±0.19 0.825±0.00 1.533±0.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000154219 synrg-006 protein_coding Danio_rerio 1e-27 130
ENSDART00000154841 synrg-003 protein_coding Danio_rerio 1e-27 130
ENSDART00000115129 synrg-001 protein_coding Danio_rerio 1e-27 130
ENST00000610513 SYNRG-201 protein_coding Homo_sapiens 0 1269
ENST00000611910 SYNRG-015 processed_transcript Homo_sapiens 0 1253
ENST00000612223 SYNRG-001 protein_coding Homo_sapiens 0 1901
ENST00000613407 SYNRG-202 protein_coding Homo_sapiens 0 1648
ENST00000614000 SYNRG-003 retained_intron Homo_sapiens 0 2013
ENST00000614196 SYNRG-018 protein_coding Homo_sapiens 0 324
ENST00000614941 SYNRG-014 protein_coding Homo_sapiens 0 1269
ENST00000616179 SYNRG-012 protein_coding Homo_sapiens 0 1648
ENST00000618176 SYNRG-203 protein_coding Homo_sapiens 0 1648
ENST00000618402 SYNRG-204 protein_coding Homo_sapiens 0 1901
ENST00000618829 SYNRG-007 retained_intron Homo_sapiens 0 1652
ENST00000619541 SYNRG-013 protein_coding Homo_sapiens 0 1648
ENST00000619914 SYNRG-009 retained_intron Homo_sapiens 0 368
ENST00000619976 SYNRG-011 processed_transcript Homo_sapiens 0 1188
ENST00000620424 SYNRG-016 protein_coding Homo_sapiens 0 527
ENST00000621136 SYNRG-006 protein_coding Homo_sapiens 0 1648
ENST00000621605 SYNRG-017 processed_transcript Homo_sapiens 0 270
ENST00000622045 SYNRG-008 protein_coding Homo_sapiens 0 1648

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