C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synergin, gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618829 SYNRG-007 ENSG00000275066 9606 - 17:37540626-37576480 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000618829
Transcript ID Breast
ENST00000618829 1.432±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HZ CIL_0005HZ_0002 CGP 17:37489831-37609496

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092834 Synrg-001 protein_coding Mus_musculus 0 1653
ENSMUST00000183456 Synrg-009 protein_coding Mus_musculus 0 1652
ENSMUST00000183714 Synrg-007 protein_coding Mus_musculus 0 1652
ENSMUST00000049714 Synrg-002 protein_coding Mus_musculus 0 1648
ENSMUST00000138676 Synrg-006 protein_coding Mus_musculus 0 545
ENSMUST00000184239 Synrg-008 retained_intron Mus_musculus 0 425
ENSMUST00000148901 Synrg-003 processed_transcript Mus_musculus 0 333
ENSMUST00000142966 Synrg-004 retained_intron Mus_musculus 0 246
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000000002 73

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