C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SNAP-associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184877 Snapin-002 ENSMUSG00000001018 10090 - 3:90488373-90491024 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartLiverMuscleTestisENSMUST00000184877
Transcript ID Adipose Bladder Breast Heart Liver Muscle Testis
ENSMUST00000184877 7.053±0.00 11.775±2.41 9.025±0.00 15.565±3.83 8.061±0.00 20.665±5.70 6.776±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 ISO SNARE binding
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0007268 IMP synaptic transmission
GO:0016079 ISO synaptic vesicle exocytosis
GO:0016188 IMP synaptic vesicle maturation
GO:0031083 IDA BLOC-1 complex
GO:0031629 IMP synaptic vesicle fusion to presynaptic membrane
GO:0045202 ISO synapse
GO:0072553 IMP terminal button organization
GO:0097352 IMP autophagic vacuole maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368685 SNAPIN-001 protein_coding Homo_sapiens 0 555
ENST00000474959 SNAPIN-003 processed_transcript Homo_sapiens 0 292
ENST00000478558 SNAPIN-004 processed_transcript Homo_sapiens 0.00000000006 73

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