C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1810043H04 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185558 1810043H04Rik-002 ENSMUSG00000078572 10090 + 11:120098944-120100363 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000185558
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000185558 4.197±1.42 11.094±1.55 7.448±0.78 9.983±3.10 10.278±4.43 15.721±4.08 13.101±7.10 9.118±3.77 7.268±2.01 6.594±1.67 7.915±0.80 8.286±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003U4 CIL_0003U4_0003 CGP 11:120090531-120100705
CIL_00043W CIL_00043W_0003 CGP 11:120098928-120151346

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000431388 C17orf89-001 protein_coding Homo_sapiens 0 224
ENST00000573090 C17orf89-005 retained_intron Homo_sapiens 0 226
ENST00000575067 C17orf89-003 processed_transcript Homo_sapiens 0.0000000001 69
ENST00000576002 C17orf89-002 protein_coding Homo_sapiens 4e-28 128
ENST00000577158 C17orf89-007 processed_transcript Homo_sapiens 7e-24 113
ENST00000605837 RP11-396C23.3-001 processed_pseudogene Homo_sapiens 2e-17 92

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