C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transforming growth factor, beta receptor associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186694 Tgfbrap1-003 ENSMUSG00000070939 10090 - 1:43047220-43092729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186694
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186694 11.105±1.17 2.302±0.00 5.331±0.82 3.588±0.33 4.672±1.28 5.023±1.32 3.048±0.30 12.237±1.57 3.693±2.20 10.349±1.81 3.441±0.59 4.483±0.69 3.690±0.61 1.023±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096O CIL_00096O_0002 VISTA 1:42588323-43189246
CIL_0003Y3 CIL_0003Y3_0002 CGP 1:42952872-43098637
CIL_0003Y4 CIL_0003Y4_0002 CGP 1:43047200-43115947

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005083 IEA small GTPase regulator activity
GO:0005737 IEA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258449 TGFBRAP1-201 protein_coding Homo_sapiens 0 2802
ENST00000393359 TGFBRAP1-001 protein_coding Homo_sapiens 0 2948
ENST00000595531 TGFBRAP1-202 protein_coding Homo_sapiens 0 2802

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