C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187077 Imp4-008 ENSMUSG00000026127 10090 + 1:34439898-34442569 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J7 CIL_0001J7_0002 CGP 1:34436670-34449356
CIL_0001J6 CIL_0001J6_0002 CGP 1:34439851-34475733

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259239 IMP4-001 protein_coding Homo_sapiens 2e-22 111
ENST00000409649 IMP4-010 protein_coding Homo_sapiens 2e-23 113
ENST00000409935 IMP4-002 protein_coding Homo_sapiens 1e-22 111
ENST00000428740 IMP4-012 protein_coding Homo_sapiens 3e-23 113
ENST00000456713 IMP4-013 nonsense_mediated_decay Homo_sapiens 5e-23 111
ENST00000460766 IMP4-004 retained_intron Homo_sapiens 7e-23 113
ENST00000462392 IMP4-003 retained_intron Homo_sapiens 5e-23 113
ENST00000464432 IMP4-005 retained_intron Homo_sapiens 1e-22 111
ENST00000470672 IMP4-007 retained_intron Homo_sapiens 2e-23 113
ENST00000473689 IMP4-006 retained_intron Homo_sapiens 9e-23 111
ENST00000477375 IMP4-008 retained_intron Homo_sapiens 2e-23 113
ENST00000490895 IMP4-009 retained_intron Homo_sapiens 2e-23 113
ENST00000495606 IMP4-011 retained_intron Homo_sapiens 2e-23 113

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