C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5253
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187104 RP24-240I9.2-001 ENSMUSG00000099741 10090 - 1:51317528-51318552 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000187104
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000187104 0.126±0.02 0.083±0.01 0.040±0.01 0.186±0.03 0.079±0.04 0.083±0.00 0.016±0.01 0.053±0.01 0.058±0.03 0.111±0.08 0.023±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022K CIL_00022K_0002 CGP 1:51289126-51478425

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265097 THOC3-001 protein_coding Homo_sapiens 0 726
ENST00000502601 RP11-423H2.1-004 retained_intron Homo_sapiens 0 387
ENST00000506082 RP11-423H2.1-010 processed_transcript Homo_sapiens 0 309
ENST00000506672 RP11-423H2.1-002 processed_transcript Homo_sapiens 0 726
ENST00000507037 RP11-423H2.1-009 processed_transcript Homo_sapiens 0 540
ENST00000510300 THOC3-005 processed_transcript Homo_sapiens 0 540
ENST00000510692 RP11-423H2.1-012 processed_transcript Homo_sapiens 0 457
ENST00000511062 THOC3-011 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000511074 RP11-423H2.1-006 processed_transcript Homo_sapiens 0 315
ENST00000512851 RP11-423H2.1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 726
ENST00000513006 THOC3-007 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000513118 THOC3-006 retained_intron Homo_sapiens 0 387
ENST00000513482 THOC3-004 protein_coding Homo_sapiens 0 544
ENST00000514250 THOC3-009 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000515525 RP11-423H2.1-003 processed_transcript Homo_sapiens 0 451
ENST00000613037 AC106795.5-201 protein_coding Homo_sapiens 0 726
ENST00000622006 AC106795.3-201 protein_coding Homo_sapiens 0 726

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