C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00022K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071196-ENSDARG00000043685 CGP 7955 6:9059433-9097522
GeneTranscriptPositionBiotype
ENSDARG00000043685 (nabp1b)
nucleic acid binding protein 1b 		ENSDART00000064149 (nabp1b-001) 9091497-9097522 protein_coding
ENSDARG00000071196 (sdprb)
serum deprivation response b 		ENSDART00000143956 (sdprb-001) 9059433-9088387 protein_coding
CIL_00022K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045954-ENSMUSG00000026107 CGP 10090 1:51289126-51478425
GeneTranscriptPositionBiotype
ENSMUSG00000026107 (Nabp1)
nucleic acid binding protein 1 		ENSMUST00000027279 (Nabp1-001) 51469488-51478399 protein_coding
ENSMUST00000185534 (Nabp1-008) 51471142-51478399 protein_coding
ENSMUST00000185961 (Nabp1-010) 51471339-51473396 retained_intron
ENSMUST00000186003 (Nabp1-006) 51466007-51478067 nonsense_mediated_decay
ENSMUST00000186684 (Nabp1-005) 51469857-51478399 protein_coding
ENSMUST00000188051 (Nabp1-007) 51471129-51478425 protein_coding
ENSMUST00000188204 (Nabp1-009) 51470807-51478399 protein_coding
ENSMUST00000188303 (Nabp1-004) 51475592-51478399 retained_intron
ENSMUST00000189542 (Nabp1-003) 51465862-51478399 nonsense_mediated_decay
ENSMUST00000190103 (Nabp1-002) 51468690-51478399 nonsense_mediated_decay
ENSMUSG00000045954 (Sdpr)
serum deprivation response 		ENSMUST00000051572 (Sdpr-001) 51289126-51302960 protein_coding
ENSMUSG00000099741 (RP24-240I9.2)
predicted gene 5253 		ENSMUST00000187104 (RP24-240I9.2-001) 51317528-51318552 processed_pseudogene
ENSMUSG00000101702 (RP24-267E6.2)
RIKEN cDNA 1700072G22 gene 		ENSMUST00000189460 (RP24-267E6.2-001) 51457932-51458931 lincRNA
ENSMUSG00000101799 (RP24-555D5.2)
RIKEN cDNA 9330175M20 gene 		ENSMUST00000189867 (RP24-555D5.2-001) 51218386-51333779 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022K_0001ENSDARG00000043685ENSDART00000064149ENSDARG00000071196ENSDART00000143956CIL_00022K_0002ENSMUSG00000026107ENSMUST00000027279ENSMUST00000185534ENSMUST00000185961ENSMUST00000186003ENSMUST00000186684ENSMUST00000188051ENSMUST00000188204ENSMUST00000188303ENSMUST00000189542ENSMUST00000190103ENSMUSG00000045954ENSMUST00000051572ENSMUSG00000099741ENSMUST00000187104ENSMUSG00000101702ENSMUST00000189460ENSMUSG00000101799ENSMUST00000189867
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022K_0001ENSDARG00000043685ENSDART00000064149ENSDARG00000071196ENSDART00000143956CIL_00022K_0002ENSMUSG00000026107ENSMUST00000027279ENSMUST00000185534ENSMUST00000186003ENSMUST00000186684ENSMUST00000188051ENSMUST00000188204ENSMUST00000188303ENSMUST00000189542ENSMUST00000190103ENSMUSG00000045954ENSMUST00000051572ENSMUSG00000099741ENSMUST00000187104ENSMUSG00000101702ENSMUST00000189460ENSMUSG00000101799ENSMUST00000189867
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043685 ENSDART00000064149 N/A N/A N/A 0.099±0.04 N/A N/A 0.057±0.00 1.889±1.56 0.143±0.00 N/A 0.067±0.00 N/A N/A N/A
ENSDARG00000071196 ENSDART00000143956 N/A N/A N/A 4.109±0.71 N/A N/A 137.069±65.89 30.152±10.53 1.341±0.00 N/A 23.991±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026107 ENSMUST00000027279 9.447±2.76 20.589±3.11 14.056±3.50 1.039±0.36 26.802±10.69 2.184±0.96 4.072±0.67 5.258±1.51 2.579±0.67 6.486±1.06 1.947±0.83 4.209±2.57 22.850±7.77 8.133±1.08
ENSMUST00000185534 19.104±1.87 N/A 23.273±0.00 1.558±0.00 N/A 1.867±0.70 10.940±0.73 14.372±2.26 3.854±0.70 7.636±1.22 N/A 4.353±0.07 42.673±17.22 115.319±36.11
ENSMUST00000185961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186003 2.921±0.00 N/A 10.193±3.54 0.353±0.03 4.478±0.00 N/A N/A N/A N/A N/A 0.441±0.00 0.996±0.43 4.427±0.87 N/A
ENSMUST00000186684 N/A 3.377±1.20 N/A 0.415±0.00 16.779±3.15 0.714±0.14 N/A 3.389±1.09 0.878±0.26 2.370±0.54 1.031±0.25 1.348±0.35 10.789±3.64 5.644±0.52
ENSMUST00000188051 N/A N/A N/A 6.050±0.00 N/A N/A N/A N/A N/A N/A N/A 10.724±0.00 131.568±60.93 194.081±0.00
ENSMUST00000188204 N/A N/A N/A 1.782±0.00 N/A N/A N/A N/A N/A N/A 2.487±0.18 N/A N/A 24.722±0.00
ENSMUST00000188303 N/A N/A N/A N/A N/A 0.318±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189542 4.112±0.85 1.947±0.07 N/A N/A 10.409±2.41 0.347±0.14 N/A 2.016±0.31 0.486±0.14 1.221±0.20 N/A 0.955±0.35 4.740±0.00 3.304±0.11
ENSMUST00000190103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.674±0.00 N/A N/A
ENSMUSG00000045954 ENSMUST00000051572 113.342±48.34 22.852±2.74 47.729±3.33 1.743±0.62 54.580±9.54 22.163±2.09 39.255±4.43 13.240±0.92 7.523±2.84 213.866±14.50 12.916±0.90 31.515±7.02 6.998±4.97 1.077±0.32
ENSMUSG00000099741 ENSMUST00000187104 0.126±0.02 N/A 0.083±0.01 0.040±0.01 0.186±0.03 N/A 0.079±0.04 0.083±0.00 0.016±0.01 0.053±0.01 0.058±0.03 0.111±0.08 0.023±0.01 N/A
ENSMUSG00000101702 ENSMUST00000189460 N/A N/A N/A 0.018±0.00 N/A 0.179±0.00 N/A N/A 0.041±0.00 N/A N/A N/A 0.086±0.00 3.251±0.46
ENSMUSG00000101799 ENSMUST00000189867 0.055±0.02 N/A 0.060±0.01 0.044±0.00 0.054±0.02 N/A 0.028±0.02 N/A 0.005±0.00 0.045±0.02 N/A 0.010±0.00 0.006±0.00 0.062±0.03

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