C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | 5'-3' exoribonuclease 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000187175  |
Xrn1-002 |
ENSMUSG00000032410 |
10090 | + |
9:95954859-96053027  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001B7 | CIL_0001B7_0002 | CGP | 9:95954760-96184608 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000264951
|
XRN1-001 | protein_coding | Homo_sapiens | 0 | 5112 |
|
ENST00000392981
|
XRN1-004 | protein_coding | Homo_sapiens | 0 | 5112 |
|
ENST00000463916
|
XRN1-003 | protein_coding | Homo_sapiens | 0 | 1929 |
|
ENST00000465507
|
XRN1-010 | retained_intron | Homo_sapiens | 0 | 346 |
|
ENST00000467077
|
XRN1-014 | retained_intron | Homo_sapiens | 0 | 579 |
|
ENST00000468894
|
XRN1-013 | processed_transcript | Homo_sapiens | 3e-23 | 111 |
|
ENST00000470537
|
XRN1-007 | retained_intron | Homo_sapiens | 0 | 610 |
|
ENST00000472625
|
XRN1-011 | retained_intron | Homo_sapiens | 0 | 473 |
|
ENST00000472697
|
XRN1-005 | retained_intron | Homo_sapiens | 0 | 3304 |
|
ENST00000477237
|
XRN1-009 | protein_coding | Homo_sapiens | 0 | 941 |
|
ENST00000486211
|
XRN1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 959 |
|
ENST00000489241
|
XRN1-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 187 |
|
ENST00000498077
|
XRN1-006 | protein_coding | Homo_sapiens | 0 | 2861 |
