C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | 5'-3' exoribonuclease 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000486211  |
XRN1-002 |
ENSG00000114127 |
9606 | - |
3:142418419-142448012  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0004527 | IEA | exonuclease activity |
| GO:0090305 | IEA | nucleic acid phosphodiester bond hydrolysis |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000034981
|
Xrn1-201 | protein_coding | Mus_musculus | 0 | 959 |
|
ENSMUST00000190665
|
Xrn1-003 | protein_coding | Mus_musculus | 0 | 959 |
|
ENSMUST00000187175
|
Xrn1-002 | retained_intron | Mus_musculus | 0 | 959 |
|
ENSMUST00000189612
|
Xrn1-005 | retained_intron | Mus_musculus | 0 | 959 |
|
ENSMUST00000185633
|
Xrn1-001 | protein_coding | Mus_musculus | 0 | 959 |
|
ENSMUST00000189806
|
Xrn1-008 | retained_intron | Mus_musculus | 0 | 390 |
|
ENSMUST00000185759
|
Xrn1-007 | retained_intron | Mus_musculus | 0 | 261 |
|
ENSMUST00000189106
|
Xrn1-009 | protein_coding | Mus_musculus | 0 | 226 |
