C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kin of IRRE like 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187182 Kirrel3-006 ENSMUSG00000032036 10090 + 9:34488936-35036310 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyMuscleOvaryPlacentaTestisENSMUST00000187182
Transcript ID Adrenal Colon Heart Kidney Muscle Ovary Placenta Testis
ENSMUST00000187182 0.181±0.03 0.125±0.00 0.178±0.11 0.099±0.06 0.158±0.08 0.222±0.02 0.377±0.31 0.114±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086K CIL_00086K_0002 VISTA 9:34257589-34859390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0002121 IMP inter-male aggressive behavior
GO:0005515 IPI protein binding
GO:0005576 IDA extracellular region
GO:0005886 IDA plasma membrane
GO:0016021 IDA integral component of membrane
GO:0021740 IMP principal sensory nucleus of trigeminal nerve development
GO:0030097 IDA hemopoiesis
GO:0030165 NAS PDZ domain binding
GO:0030424 IDA axon
GO:0043198 IDA dendritic shaft
GO:0048812 IMP neuron projection morphogenesis
GO:0072102 IMP glomerulus morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000416561 KIRREL3-201 protein_coding Homo_sapiens 0 1923
ENST00000525144 KIRREL3-001 protein_coding Homo_sapiens 0 1923
ENST00000525704 KIRREL3-003 protein_coding Homo_sapiens 0 2045
ENST00000529097 KIRREL3-004 protein_coding Homo_sapiens 0 1696

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