C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7895
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187459 RP23-193H10.1-001 ENSMUSG00000100347 10090 - 1:94468715-94469887 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000187459
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000187459 0.071±0.03 1.971±0.35 1.033±0.69 0.162±0.07 0.044±0.01 0.064±0.01 0.454±0.73 0.157±0.03 0.055±0.03 0.098±0.07 0.045±0.04 0.219±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013103 ppm1ba-201 protein_coding Danio_rerio 0 532
ENSDART00000144755 ppm1ba-001 protein_coding Danio_rerio 0 532
ENSDART00000126725 ppm1ba-002 protein_coding Danio_rerio 0 335
ENST00000282412 PPM1B-001 protein_coding Homo_sapiens 0 1443
ENST00000345249 PPM1B-003 protein_coding Homo_sapiens 0 405
ENST00000378540 PPM1B-007 processed_transcript Homo_sapiens 0 1441
ENST00000378551 PPM1B-002 protein_coding Homo_sapiens 0 1483
ENST00000409432 PPM1B-004 protein_coding Homo_sapiens 0 1441
ENST00000409473 PPM1B-011 protein_coding Homo_sapiens 0 824
ENST00000409486 PPM1B-006 retained_intron Homo_sapiens 0 1216
ENST00000419807 PPM1B-005 protein_coding Homo_sapiens 0 1441
ENST00000459690 PPM1B-010 processed_transcript Homo_sapiens 0 274
ENST00000487286 PPM1B-009 processed_transcript Homo_sapiens 0 228
ENST00000488866 PPM1B-012 retained_intron Homo_sapiens 0 231

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