C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187690 Ppp1r18-201 ENSMUSG00000034595 10090 + 17:35866615-35875596 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000187690
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000187690 8.919±1.74 8.093±1.18 12.554±0.20 6.320±0.14 14.096±2.53 4.478±1.06 3.935±0.63 2.726±0.50 1.961±1.27 9.505±1.74 1.087±0.47 12.777±3.53 6.397±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785
CIL_0006UK CIL_0006UK_0002 CGP 17:35861318-35875596

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003779 IEA actin binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process
GO:0019902 IEA phosphatase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274853 PPP1R18-001 protein_coding Homo_sapiens 0 933
ENST00000383573 PPP1R18-002 protein_coding Homo_sapiens 0 933
ENST00000399199 PPP1R18-002 protein_coding Homo_sapiens 0 933
ENST00000400554 PPP1R18-001 protein_coding Homo_sapiens 0 933
ENST00000412189 PPP1R18-001 protein_coding Homo_sapiens 0 928
ENST00000435006 PPP1R18-001 protein_coding Homo_sapiens 0 265
ENST00000435929 PPP1R18-002 protein_coding Homo_sapiens 0 928
ENST00000437121 PPP1R18-001 protein_coding Homo_sapiens 0 933
ENST00000438815 PPP1R18-001 protein_coding Homo_sapiens 0 933
ENST00000438945 PPP1R18-002 protein_coding Homo_sapiens 0 933
ENST00000443517 PPP1R18-001 protein_coding Homo_sapiens 0 933
ENST00000444206 PPP1R18-002 protein_coding Homo_sapiens 0 933
ENST00000449705 PPP1R18-002 protein_coding Homo_sapiens 0 933
ENST00000451544 PPP1R18-002 protein_coding Homo_sapiens 0 933
ENST00000455026 PPP1R18-002 protein_coding Homo_sapiens 0 265
ENST00000455935 PPP1R18-001 protein_coding Homo_sapiens 0 933
ENST00000465704 PPP1R18-003 processed_transcript Homo_sapiens 0 448
ENST00000465770 PPP1R18-004 processed_transcript Homo_sapiens 0 265
ENST00000467662 PPP1R18-004 processed_transcript Homo_sapiens 0 265
ENST00000470587 PPP1R18-004 processed_transcript Homo_sapiens 0 265
ENST00000472334 PPP1R18-003 processed_transcript Homo_sapiens 0 448
ENST00000477065 PPP1R18-004 processed_transcript Homo_sapiens 0 265
ENST00000487859 PPP1R18-003 processed_transcript Homo_sapiens 0 265
ENST00000488116 PPP1R18-004 processed_transcript Homo_sapiens 0 265
ENST00000488324 PPP1R18-003 processed_transcript Homo_sapiens 0 448
ENST00000490538 PPP1R18-004 processed_transcript Homo_sapiens 0 265
ENST00000491628 PPP1R18-003 processed_transcript Homo_sapiens 0 448
ENST00000492746 PPP1R18-003 processed_transcript Homo_sapiens 0 448
ENST00000493833 PPP1R18-003 processed_transcript Homo_sapiens 0 448
ENST00000494832 PPP1R18-004 processed_transcript Homo_sapiens 0 265
ENST00000496173 PPP1R18-004 processed_transcript Homo_sapiens 0 265
ENST00000498031 PPP1R18-003 processed_transcript Homo_sapiens 0 448
ENST00000615527 PPP1R18-201 protein_coding Homo_sapiens 0 933
ENST00000615892 PPP1R18-005 protein_coding Homo_sapiens 0 676

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