C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187985 Ptpn7-002 ENSMUSG00000031506 10090 + 1:135132700-135144034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000187985
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000187985 0.729±0.33 0.904±0.11 0.375±0.08 0.036±0.00 5.029±2.41 1.114±0.25 0.233±0.09 0.413±0.21 2.117±1.79 1.994±0.34 0.034±0.00 0.855±0.22 0.383±0.28 0.345±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 TAS protein tyrosine phosphatase activity
GO:0005856 IEA cytoskeleton
GO:0006470 IMP protein dephosphorylation
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309017 PTPN7-001 protein_coding Homo_sapiens 0 1465
ENST00000358540 PTPN5-001 protein_coding Homo_sapiens 2e-24 119
ENST00000367279 PTPN7-003 protein_coding Homo_sapiens 0 1389
ENST00000396168 PTPN5-006 protein_coding Homo_sapiens 2e-24 119
ENST00000396170 PTPN5-002 protein_coding Homo_sapiens 2e-24 119
ENST00000435759 PTPN7-015 protein_coding Homo_sapiens 0 577
ENST00000462815 PTPN7-010 nonsense_mediated_decay Homo_sapiens 0 514
ENST00000464870 PTPN7-018 protein_coding Homo_sapiens 0 568
ENST00000467283 PTPN7-017 protein_coding Homo_sapiens 0 665
ENST00000468385 PTPN7-008 retained_intron Homo_sapiens 0 259
ENST00000476061 PTPN7-020 protein_coding Homo_sapiens 0 630
ENST00000477554 PTPN7-005 protein_coding Homo_sapiens 0 1387
ENST00000477625 PTPN7-013 protein_coding Homo_sapiens 0 756
ENST00000477854 PTPN5-004 protein_coding Homo_sapiens 2e-24 119
ENST00000479092 PTPN7-014 processed_transcript Homo_sapiens 0 451
ENST00000480836 PTPN7-007 nonsense_mediated_decay Homo_sapiens 0 1003
ENST00000486116 PTPN7-016 protein_coding Homo_sapiens 0 568
ENST00000491584 PTPN7-019 retained_intron Homo_sapiens 0 455
ENST00000492977 PTPN7-004 processed_transcript Homo_sapiens 0 1085
ENST00000495688 PTPN7-011 nonsense_mediated_decay Homo_sapiens 0 1454
ENST00000496197 PTPN7-009 nonsense_mediated_decay Homo_sapiens 0 1162

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