C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | protein tyrosine phosphatase, non-receptor type 18 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000188884  |
Ptpn18-005 |
ENSMUSG00000026126 |
10090 | + |
1:34459792-34470324  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001J6 | CIL_0001J6_0002 | CGP | 1:34439851-34475733 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000175756
|
PTPN18-001 | protein_coding | Homo_sapiens | 0 | 444 |
|
ENST00000347849
|
PTPN18-002 | protein_coding | Homo_sapiens | 0 | 444 |
|
ENST00000409022
|
PTPN18-003 | protein_coding | Homo_sapiens | 0 | 335 |
|
ENST00000428843
|
PTPN18-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 211 |
|
ENST00000462996
|
PTPN18-011 | retained_intron | Homo_sapiens | 0 | 235 |
|
ENST00000464576
|
PTPN18-015 | retained_intron | Homo_sapiens | 1e-32 | 143 |
|
ENST00000483617
|
PTPN18-007 | retained_intron | Homo_sapiens | 0 | 215 |
|
ENST00000489215
|
PTPN18-005 | retained_intron | Homo_sapiens | 0 | 215 |
|
ENST00000490137
|
PTPN18-016 | retained_intron | Homo_sapiens | 7e-21 | 104 |
|
ENST00000490812
|
PTPN18-010 | retained_intron | Homo_sapiens | 2.00386e-43 | 180 |
|
ENST00000495400
|
PTPN18-009 | retained_intron | Homo_sapiens | 0 | 244 |
