C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5511
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189380 RP23-32C18.4-001 ENSMUSG00000100615 10090 + 19:11438031-11438832 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverOvaryPlacentaTestisENSMUST00000189380
Transcript ID Bladder Brain Breast Liver Ovary Placenta Testis
ENSMUST00000189380 0.160±0.15 0.258±0.07 0.116±0.03 0.194±0.21 0.050±0.01 0.182±0.19 0.172±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LI CIL_0002LI_000L CGP 19:11404770-11463549

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216281 HSP90AA1-002 protein_coding Homo_sapiens 0 1013
ENST00000334701 HSP90AA1-001 protein_coding Homo_sapiens 0 1013
ENST00000438353 HSP90AA5P-001 transcribed_processed_pseudogene Homo_sapiens 0 699
ENST00000506634 HSP90AA6P-001 transcribed_processed_pseudogene Homo_sapiens 0 586
ENST00000530115 RP11-1033A18.1-001 processed_pseudogene Homo_sapiens 0 944
ENST00000554401 HSP90AA1-003 nonsense_mediated_decay Homo_sapiens 0 1013
ENST00000560130 HSP90AA1-009 retained_intron Homo_sapiens 0 329

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